Best Alignments for T0320

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1sur/T0320-1sur-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sur/T0320-1sur-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9412e-234.01e-81 1sur c.26.2.2
1gpmA/T0320-1gpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0320-1gpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2666e-211.08e-60 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1wy5A/T0320-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0320-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6569e-179.53e-56
1ni5A/T0320-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0320-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2651e-161.17e-50 c.26.2.5
d.229.1.1
1zunA/T0320-1zunA-t04-global-adpstyle1.a2m 1zunA/T0320-1zunA-t04-global-adpstyle1.al 1.6523e-125.13e-50
1xngA/T0320-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0320-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1876e-122.70e-48
1korA/T0320-1korA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1korA/T0320-1korA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6981e-105.25e-50 c.26.2.1
d.210.1.1
1wxiA/T0320-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0320-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5843e-082.64e-38
1ih8A/T0320-1ih8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ih8A/T0320-1ih8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8474e-081.81e-37 2nsyA c.26.2.1
1m1zA/T0320-1m1zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m1zA/T0320-1m1zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3121e-071.00e-32 c.26.2.1
d.153.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001