Best Alignments for T0320

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1twyA/T0320-1twyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1twyA/T0320-1twyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2368e+001.04e-01
2cqeA/T0320-2cqeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cqeA/T0320-2cqeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8578e+004.51e+02
1sx5A/T0320-1sx5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sx5A/T0320-1sx5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7914e+003.20e+01 c.52.1.2
1kcfA/T0320-1kcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kcfA/T0320-1kcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8164e+008.91e-02 a.140.2.1
c.55.3.7
1qwtA/T0320-1qwtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwtA/T0320-1qwtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3054e+001.20e+00 b.26.1.3
1d3gA/T0320-1d3gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d3gA/T0320-1d3gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1528e+001.56e+01 1d3gA c.1.4.1
1md6A/T0320-1md6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1md6A/T0320-1md6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3432e+007.08e+03 b.42.1.2
1eu8A/T0320-1eu8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eu8A/T0320-1eu8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9571e+001.70e+03 1eu8A c.94.1.1
1oa4A/T0320-1oa4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oa4A/T0320-1oa4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0656e+012.92e+02 b.29.1.11
1n08A/T0320-1n08A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n08A/T0320-1n08A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0790e+012.40e-03 b.43.5.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001