Best Alignments for T0320

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1uswA/T0320-1uswA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uswA/T0320-1uswA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3100e+008.51e+03 c.69.1.17
1twyA/T0320-1twyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1twyA/T0320-1twyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2852e+001.40e-01
1sjyA/T0320-1sjyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sjyA/T0320-1sjyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9837e+002.49e-05 d.113.1.1
1n08A/T0320-1n08A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n08A/T0320-1n08A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0539e+003.25e-03 b.43.5.1
1wlpB/T0320-1wlpB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wlpB/T0320-1wlpB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3778e+003.01e-02
1kcfA/T0320-1kcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kcfA/T0320-1kcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3925e+001.21e-01 a.140.2.1
c.55.3.7
1ov3A/T0320-1ov3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ov3A/T0320-1ov3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8643e+007.93e-01 b.34.2.1
b.34.2.1
1qwtA/T0320-1qwtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwtA/T0320-1qwtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2121e+011.63e+00 b.26.1.3
1txyA/T0320-1txyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1txyA/T0320-1txyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2905e+018.43e-01
1vheA/T0320-1vheA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vheA/T0320-1vheA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3143e+015.72e-02 b.49.3.1
c.56.5.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001