Best Alignments for T0318

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1lam/T0318-1lam-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lam/T0318-1lam-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0373e-583.97e-229 1lam c.50.1.1
c.56.5.3
2ewbA/T0318-2ewbA-t04-global-adpstyle1.a2m 2ewbA/T0318-2ewbA-t04-global-adpstyle1.al 2.2509e-085.00e-138
1tkjA/T0318-1tkjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tkjA/T0318-1tkjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2611e-021.80e-34
1qq9A/T0318-1qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qq9A/T0318-1qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2335e-021.04e-34 1xjo c.56.5.4
1tf9A/T0318-1tf9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tf9A/T0318-1tf9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2884e-016.27e-32
1x13A/T0318-1x13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x13A/T0318-1x13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2027e+001.13e-15
1v71A/T0318-1v71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v71A/T0318-1v71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9393e+001.46e-15
1cg2A/T0318-1cg2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cg2A/T0318-1cg2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9426e+002.43e-21 1cg2A c.56.5.4
d.58.19.1
1a9xA/T0318-1a9xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a9xA/T0318-1a9xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4356e+004.53e-29 a.92.1.1
c.24.1.1
c.30.1.1
c.30.1.1
d.142.1.2
d.142.1.2
2anpA/T0318-2anpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2anpA/T0318-2anpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2261e+005.41e-25

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001