Best Alignments for T0318

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1bllE/T0318-1bllE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bllE/T0318-1bllE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4884e-495.99e-218 1lam c.50.1.1
c.56.5.3
2ewbA/T0318-2ewbA-t2k-global-adpstyle1.a2m 2ewbA/T0318-2ewbA-t2k-global-adpstyle1.al 6.9055e-162.24e-136
1tkjA/T0318-1tkjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tkjA/T0318-1tkjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2044e-024.95e-34
1qq9A/T0318-1qq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qq9A/T0318-1qq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2993e-021.52e-33 1xjo c.56.5.4
1tf9A/T0318-1tf9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tf9A/T0318-1tf9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0800e-011.01e-31
2anpA/T0318-2anpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2anpA/T0318-2anpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6716e-015.41e-25
1cg2A/T0318-1cg2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cg2A/T0318-1cg2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7621e+002.43e-21 1cg2A c.56.5.4
d.58.19.1
1x13A/T0318-1x13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x13A/T0318-1x13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2123e+001.58e-12
1a9xA/T0318-1a9xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a9xA/T0318-1a9xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1411e+003.96e-26 a.92.1.1
c.24.1.1
c.30.1.1
c.30.1.1
d.142.1.2
d.142.1.2
1ve1A/T0318-1ve1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ve1A/T0318-1ve1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7447e+005.49e-16

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001