Best Alignments for T0317

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wrmA/T0317-1wrmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wrmA/T0317-1wrmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6795e-211.63e-100
1yz4A/T0317-1yz4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yz4A/T0317-1yz4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4026e-212.48e-98
1vhrA/T0317-1vhrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vhrA/T0317-1vhrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6384e-201.59e-95 1vhrA c.45.1.1
1d5rA/T0317-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0317-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6360e-156.59e-57 1d5rA b.7.1.1
c.45.1.1
1oheA/T0317-1oheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oheA/T0317-1oheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2208e-146.26e-57 c.45.1.1
c.45.1.1
1rxdA/T0317-1rxdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxdA/T0317-1rxdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8357e-141.33e-58
2c46A/T0317-2c46A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c46A/T0317-2c46A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9590e-132.29e-58
1yn9A/T0317-1yn9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yn9A/T0317-1yn9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6475e-133.25e-57
2b49A/T0317-2b49A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b49A/T0317-2b49A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1676e-131.30e-62
1fpzA/T0317-1fpzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fpzA/T0317-1fpzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8190e-134.97e-58 1fpzA c.45.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001