Best Alignments for T0317

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1yfoA/T0317-1yfoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yfoA/T0317-1yfoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8500e-202.06e-52 2shpA c.45.1.2
1wrmA/T0317-1wrmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wrmA/T0317-1wrmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5895e-198.34e-85
1a5y/T0317-1a5y-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a5y/T0317-1a5y-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1500e-194.35e-51 1pty c.45.1.2
1mkp/T0317-1mkp-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkp/T0317-1mkp-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5770e-191.82e-80 1vhrA c.45.1.1
1yz4A/T0317-1yz4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yz4A/T0317-1yz4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7645e-194.36e-84
1d5rA/T0317-1d5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0317-1d5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0867e-151.17e-53 1d5rA b.7.1.1
c.45.1.1
1zclA/T0317-1zclA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zclA/T0317-1zclA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8930e-142.03e-59
1zckA/T0317-1zckA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zckA/T0317-1zckA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9843e-143.30e-59
1x24A/T0317-1x24A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x24A/T0317-1x24A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9524e-145.52e-57
1oheA/T0317-1oheA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oheA/T0317-1oheA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2026e-142.87e-54 c.45.1.1
c.45.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001