Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vl2A/T0316-1vl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0316-1vl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6522e-363.02e-91 c.26.2.1
d.210.1.1
1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3585e-244.34e-70 c.26.2.5
d.229.1.1
1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1093e-232.39e-61
1gpmA/T0316-1gpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9412e-221.99e-65 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9384e-155.94e-45
2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2485e-131.29e-48
1ih8A/T0316-1ih8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ih8A/T0316-1ih8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1582e-123.07e-39 2nsyA c.26.2.1
1wxiA/T0316-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0316-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7432e-103.00e-39
1ct9A/T0316-1ct9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ct9A/T0316-1ct9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2452e-084.82e-22 1ct9A c.26.2.1
d.153.1.1
2c5sA/T0316-2c5sA-t04-local-adpstyle1.a2m 2c5sA/T0316-2c5sA-t04-local-adpstyle1.al 4.5786e-075.29e-27

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001