Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3669e+004.94e-02
1gmyA/T0316-1gmyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gmyA/T0316-1gmyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2985e+003.67e-08 d.3.1.1
2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5864e+003.11e-08
1ru8A/T0316-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5382e+002.98e-08 c.26.2.1
1el5A/T0316-1el5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1el5A/T0316-1el5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8272e+001.25e-03 1b3mA c.3.1.2
d.16.1.3
1dq3A/T0316-1dq3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dq3A/T0316-1dq3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5721e+006.46e-03 1dq3A b.86.1.2
d.50.3.1
d.95.2.2
d.95.2.2
2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9429e+001.19e-06
1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7172e+001.09e-02
1vl2A/T0316-1vl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0316-1vl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1622e+002.23e-02 c.26.2.1
d.210.1.1
1tif/T0316-1tif-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tif/T0316-1tif-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1732e+003.68e-05 1tif d.15.8.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001