Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gmyA/T0316-1gmyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gmyA/T0316-1gmyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8191e+003.67e-08 d.3.1.1
1el5A/T0316-1el5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1el5A/T0316-1el5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2883e+001.31e-03 1b3mA c.3.1.2
d.16.1.3
1xngA/T0316-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8049e+001.90e-01
1dq3A/T0316-1dq3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dq3A/T0316-1dq3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5736e+004.58e-02 1dq3A b.86.1.2
d.50.3.1
d.95.2.2
d.95.2.2
2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6965e+003.11e-08
1k3iA/T0316-1k3iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k3iA/T0316-1k3iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8716e+002.75e+03 b.1.18.2
b.18.1.1
b.69.1.1
2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6617e+001.19e-06
1tif/T0316-1tif-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tif/T0316-1tif-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8416e+003.68e-05 1tif d.15.8.1
1tzyD/T0316-1tzyD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tzyD/T0316-1tzyD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2772e+012.26e-05 a.22.1.1
2gxfA/T0316-2gxfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gxfA/T0316-2gxfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7638e+011.62e-03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001