Best Alignments for T0315

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1j6oA/T0315-1j6oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j6oA/T0315-1j6oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6427e-292.43e-154 c.1.9.12
1yixA/T0315-1yixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yixA/T0315-1yixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0116e-287.47e-158
1xwyA/T0315-1xwyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwyA/T0315-1xwyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8044e-285.04e-158
1zzmA/T0315-1zzmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zzmA/T0315-1zzmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4572e-271.49e-155
1bf6A/T0315-1bf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bf6A/T0315-1bf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8313e-142.17e-92 1pscA c.1.9.3
2d2jA/T0315-2d2jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d2jA/T0315-2d2jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6456e-096.01e-69
1xrtA/T0315-1xrtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xrtA/T0315-1xrtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4168e-091.66e-60
2gwgA/T0315-2gwgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gwgA/T0315-2gwgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0937e-087.37e-49
2f6kA/T0315-2f6kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6kA/T0315-2f6kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5887e-082.07e-57
1gkpA/T0315-1gkpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gkpA/T0315-1gkpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8399e-071.67e-44 b.92.1.3
c.1.9.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001