Best Alignments for T0315

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1j6oA/T0315-1j6oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j6oA/T0315-1j6oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2298e-282.43e-154 c.1.9.12
1yixA/T0315-1yixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yixA/T0315-1yixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7880e-287.47e-158
1zzmA/T0315-1zzmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zzmA/T0315-1zzmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8072e-271.49e-155
1xwyA/T0315-1xwyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwyA/T0315-1xwyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7841e-275.04e-158
2d2jA/T0315-2d2jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d2jA/T0315-2d2jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2533e-072.48e-44
1bf6A/T0315-1bf6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bf6A/T0315-1bf6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4516e-071.51e-60 1pscA c.1.9.3
1xrtA/T0315-1xrtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xrtA/T0315-1xrtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5009e-041.83e-33
1j6pA/T0315-1j6pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j6pA/T0315-1j6pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4298e-041.25e-21 b.92.1.4
c.1.9.9
2gokA/T0315-2gokA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gokA/T0315-2gokA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5269e-033.63e-37
1k6wA/T0315-1k6wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k6wA/T0315-1k6wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3527e-031.64e-35 b.92.1.2
c.1.9.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001