Best Alignments for T0313

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1bg2/T0313-1bg2-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bg2/ 6.3508e-461.20e-159 1bg2 c.37.1.9
1x88A/T0313-1x88A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x88A/ 2.5053e-422.85e-151
1t5cA/T0313-1t5cA-t2k-global-adpstyle1.a2m 1t5cA/ 3.1716e-171.23e-112
2gryA/T0313-2gryA-t2k-local-adpstyle1.a2m 2gryA/ 9.3933e-161.19e-97

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001