Best Alignments for T0313

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1bg2/T0313-1bg2-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bg2/ 9.1860e-509.57e-158 1bg2 c.37.1.9
1x88A/T0313-1x88A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x88A/ 7.7239e-466.74e-146
1t5cA/T0313-1t5cA-t06-global-adpstyle1.a2m 1t5cA/ 3.9795e-022.01e-111
2gryA/T0313-2gryA-t06-local-adpstyle1.a2m 2gryA/ 8.1026e-022.74e-94

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001