Best Alignments for T0312

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xv2A/T0312-1xv2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xv2A/T0312-1xv2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2124e+002.97e-08
2al3A/T0312-2al3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al3A/T0312-2al3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2539e+009.18e-06
1vcoA/T0312-1vcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vcoA/T0312-1vcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1791e+003.06e-05 c.23.16.1
c.37.1.10
1guaB/T0312-1guaB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1guaB/T0312-1guaB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0116e+011.65e-05 1c1yB d.15.1.5
1m1hA/T0312-1m1hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m1hA/T0312-1m1hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0615e+013.46e-10 b.114.1.1
d.58.42.1
2fug7/T0312-2fug7-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fug7/T0312-2fug7-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2540e+016.38e-09
1c3kA/T0312-1c3kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c3kA/T0312-1c3kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5311e+011.12e-06 1jotA b.77.3.1
1gqoO/T0312-1gqoO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gqoO/T0312-1gqoO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5470e+017.06e-05 c.23.13.1
1b1yA/T0312-1b1yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b1yA/T0312-1b1yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5687e+013.58e-03 1byb c.1.8.1
1a3gA/T0312-1a3gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a3gA/T0312-1a3gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6777e+014.66e-05 1daaA e.17.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001