(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0312 GR013, Archaeoglobus fulgidus, 146 res
              10        20           30        40         50        60 
              |         |            |         |          |         | 
   1 MKVFEFEVGKGFLLRLDYGKDLVRQIEEF...LEEKGIHAAHIS.AIGAVRSAVIGYYDQEKKE.
   2 MGYKEVTPKRRLMGRFPHGSDLLQEINKV...ITEENILSGEVR.IIGAVTKAVFGYYDSESKN.
   3 MKVFEFEVGKGFLLRLDYGKDLVRQIEEF...LEEKGIHAAHIS.AIGAVRSAVIGYYDQEKKE.
   4 -------KGRTFLGRLPKGGDLLQELTKV...VRENNIETGVFM.LIGAVEKAKFGYYLQDERE.
   5 MGYKSVLIERKFMGRFPYGKDLLEEINKL...ITEENILSGEIR.IIGAVSKAVFGYYDAQSKN.
   6 MKASQGSIGRVFIIRLEDGDKVPSCLEDF...ARTQHISHAQVV.LIGGIEGGQVVVGPRQSREy
   7 --------GKTIVLVLEQGEDIVEAVTDI...AREQNGKFGTVS.GIGACSSAELNFYNLETQT.
   8 MDYREVDSTSEFVCRLEHGGDWRAQIEAF...ADEQGIDAGFFY.GLGAVQDAELMFYDQDRTE.
   9 MKASQGSLGRVFIIRLEDGDRVPTCLEDF...ARTQHISHAQVV.LIGGIEGGQVVVGPRQSREy
  10 MKASQGSLGRVFIIRLEDGDRVPTCLEDF...ARTQQISHAQVV.LIGGIEGGQVVVGPRQSREy
  11 MKYTEAKQGRVFVIRLEDGEIVHERIEQF...VKDHGIERATLF.AVGGADKGTLLVVGPGESRs
  12 -----NKDGQTFLLVLDKGEDIVEVLTQF...AMEQEMKFGSVS.GIGACDNVTLIFYNLDTQK.
  13 MDYQRVEGDREYVARLEHGRDWREQIEAF...AAEEDIDAAFFL.GLGAVQDATVYFYDQVEQE.
  14 --------GRVYLFRIPEGKEIIEFLREF...AEKENIKVGIIS.AIGTLRNPVIGYFMEEEKK.
  15 MDYSKGNIGRVFTVRIDTGEDLLRELEGI...ATKEEIKSAVFT.LLGAVAKVNLVVGPKENAI.
  16 MKYSEAQQGRVFVIRLEDGDIFHEEIERF...AKEKGIERAYLN.VVGGADKESKLVVGPEESRt
  17 ----------RWMGKLGRGDDLLESISLI...CRDNNIRLGRVE.AIGAVEKAVLGYYHQQNRA.
  18 -----------FMGKLPHQADLIGALIEA...AGANGIRAGAIQ.VIGALQGAKLGFYDQWSKS.
  19 -----------IAVRLTKGMDLKLSLAKL...VAEHDIKAGSIAsCVGCISDLNLRLAGAES--.
  20 ----EGHSGRRLAFRLAYGCDLLEALQGI...VEEADVLFGSIN.FLGAVQKARVGYYLQDEKR.
  21 MKYSEAKQGRTFIIRLEDGDILHEKIEEF...ARIHSIEAAALI.AIGGADAGSKLVVGPEQGRg
  22 ------KLNSGTVLVFDRGDEVVSTLTKF...AKENRVAAAHFT.AIGAFSDAVIGYFDLEKKD.
  23 -NAREVTGGREFVVRLDPGSEWRTELETL...AATEDITAAWFT.GLGAVQDAELWYYDQDDFE.
  24 --TGMFSLGRTYLFRVPEGEELLTYIKNF...CKKEGIETAIIN.GIGTLKNPKIGYFLEEKKE.
  25 -----VEGQRRIMGRLEKGADILEGLSAV...CREENVSMGRIE.AIGAVTGARIGYYDQHAGT.
  26 MKHAEARPGRTFVIRLEDGEILHEQLEAF...AERESITRASLI.AVGAADKGSRLVVGPEESRe
  27 ------SIGRVYLFRIPEGEEIISYITRF...CEKNNVKIAVVK.AIGSLRNPKIAYFVEEEGK.
  28 ------KAGRTFLFRVPAGEDLLEAINRS...AESRGIKTGVVM.GIGSLRNPVVGYYSEEEKR.
  29 MKYSEAKQGRTFIIRLEDGETVHEEIETF...AKKQAIARASVL.LLGGADKESSLVVGPEESRa
  30 MKYSEAQQGRIFVIRLEDGEIVHEELEKF...AHSHAIERAQLI.IIGGADKGSKLVVGPEESRe
  31 MKFSRARQGRIFILRLEDGEIVHEMIERF...AEEQSIRAAALI.AVGGADAGSRLVVGPEEGRs
  32 -------SNHTILLVLEKGEDIVECITTF...ADDQDLTFTSVS.GIGACDDVVLKFFNLTTKQ.
  33 -------SNHTILLVLEKGEDIIECITTF...ADDQDLTFTSVS.GIGACDDVILKFFNLTTKQ.
  34 -------SNHTILLVLEKGEDIVECITNF...ADDQDLTFTSVS.GIGACDDVVLKFFNLTTKQ.
  35 -------PSAVYVVVLDQGEDAVAELTAF...ARERSLGASQVT.AVGAFSQAVVGWFDRQAKD.
  36 MEYAKGRIGRVFTVRIDHGDDLILELIKL...AELEKIESAVFM.LLGALKEGKLVAGPKENRR.
  37 MEYTKGRIGRVFTVRVDHGDDLILELIKL...AELEKIESAVFM.LLGALREGKLVTGPKENRR.
  38 MEYAAGKIGRVFTVRIDSGDDLILELIKL...AELERIESAVFV.LLGALKEAKIVTGPKESII.
  39 --MDYKKYGDKYLIRLDRGDEIIESIKVL...CKKEDIKGAKVS.GIGATNQVVIGIYELENKK.
  40 -----------IAVRLTKDMDLKLSLTKL...VEQHGIKAGSIAsCVGCISHLNLRLAGAES--.
  41 -----------IAVRLTKGMDLKLSLAKL...VEQHGIKAGSIAsCVGCTSYLNLRLAGAES--.
  42 ----------MMMVGLEYGSDIMDAIRGV...AADRSIDSGFFS.VIGALSSANLAYYDQTEKV.
  43 ----EKNGLRTFALAFRPGDEVLRGITGF...AGELGLDAAEVT.GLGAFSSATLGYFDLEKRD.
  44 -------------LRLFPGDDLRVALENV...LHQSGLQAAFVIqGIGSLSVAQLRFAGKED--.
  45 ------------ATRLTRGQDLKLELQKL...VTTQNISAGSIAsCVGCVSQLNIRLANANN--.
  46 -----------IALRLTRGMDLKQQIVQL...VQQHRIHAGSIAsCVGCLSTLHIRLADSVS--.
  47 ---KYMKTPTGYLMVLRHGDNVLQNLEQL...ARDEHIPSASFV.GIGFMSEATFGFYDFGRKQ.
  48 -------------LRLCPGDDLRGALEDM...VRQRQVSAAFVMqGIGSLSVARLRFAGNES--.
  49 -------------LRLSPGDDLRGAIEAA...LHRHEAHAAFVIqGIGSLSVAQLRFAGVDQ--.
  50 -------------LRLSPGDDLRASIEHA...LRRLDVHAAFVLqGIGSLSVARVRYAGVDS--.
  51 ----------VIAKRLEYGADLKRAIANI...VTEHNITAGSIAaCTGCLSEVKLRLAGAQS--.
  52 MDYRSGQAGRVFSVRFDEGDDLLAGLEEV...IRAENIRCGWFW.VLGGLRRAEVVTGPKEPVM.
  53 --YKEYKQGRRFILKIIPGESLVECITQF...ALTENIHYAVILsAVGSVRDVCLRGIKSGAKLp
  54 --------NTSYCFRLRPGQDLKKELLFY...CQKYHLHAACVVsAVGSVDKAHLRMSGGKD--.
  55 ------------ATRLTRGQDLKLELQKL...VTAHNISAGSIAsCVGCVSQLNIRLANANN--.
  56 --YSYKKIGNKYIVSINNHTEIVKALNAF...CKEKGILSGSIN.GIGAIGELTLRFFNPKTKA.
  57 -------------LRLSPGDDLRASIEHA...LRQHDARAAFVIqGIGSLSVAQLRFAGADV--.
  58 -------------FRLTQGDDLKASVLAY...VKANNIKAGSLLsCAGCLTTARIRLADESK--.
  59 ------------AFRLTQGTDLKKSILHF...VQDNKIQAGSLLsGIGCLSKVNIRLADESK--.
  60 ------GAERTFILIVDPEEEAFDAIRRF...ARAENINAASVT.AIGAFATATLAFFDLKTQD.
  61 -------------LRLSPGDDLRAAIEHA...SRGLRAHAAFVIqGIGSLNVAQLRYAGVDS--.
  62 ----------VIAKRLEYGADLKRAIANI...VIEHNITAGSIAaCTGCLSEVKLRLAGAQS--.
  63 --------ERTFILVLEEGDEAFSAISAF...AAQADIAGASVT.AIGAFSSATVGFFRIESRD.
  64 ------------AFRLTQGTALKKSILHF...AQDNKIQAGSLLsGIGCLSKVIIRLADESK--.
  65 --------GNFIVARFDKNTSFFEDLEEV...CNKHGVKAGTVVwAIGMLKDFEVGYWNGQD--.
  66 --------GNFIVARFDKNTSFFEDLEEV...CNKHGVKAGTVVwAIGMLKDFEVGYWNGQD--.
  67 MQYGVGEMGRIFVLRLEEGDQLPDIVEQF...AEEHGIQRGLVF.YVGGGADGSRLVVGPRENMe
  68 ------QKGQQIICRLEVGDELITELKYL...AATLPDQLGAIS.GIGACNDVTVSIYSPDSDS.
  69 -------------FRLTQGDDLKASVLAY...VKANSIKAGSLLsCAGCLTTARIRLADESK--.
  70 ---------SIITARFDKETDFFTDLVDL...CNKYEVKSGTVLwAIGMLKEFQIGYWNGND--.
  71 -------------LRLEPGDDLRRRLEAL...TVERGWPAAFVIaGIGSLRITALRLAEATE--.
  72 -----------------PEEEAFDAIRRF...ARAENINAASVT.AIGAFATATLAFFDLKTQD.
  73 ---------KTYAVIFSTGDEVVSGLTEF...AHTYKVKSGHYQ.GIGDALHVEAGWFDYHRKE.
  74 ---SYSSGSRAGTIRLPEGAIVMDAIAAH...LEPLEIRSAALD.LSGLVLGPMQFVMPTYSKTa
  75 ----------IHVLRLNPGDDLRAELQSAfnaLQARGCRAACVIsAVGSLSRAVLRHAAQAQ--.
  76 -WFKECSGGRRFLVKISQGEWLVESLCRF...AAEAGVRSAVILsAVGSVTRVTFRGIKAGAKLp
  77 --------NNIIVAKFEANEDVLSNLNLL...VEKYSIKTGFIDmGIGMIKNLKIGYWNINK--.
  78 -----------------------------...----EAHAAFVIqGIGSLSVAQLRFAGVDE--.
  79 ------SPGRVYAVKIDEGEDVHSVLSSL...AEAEDLGFAMVT.GIGGMAEATVAFYSPPEAT.
  80 -----TQFDRVVILRFKFGTDLLAGLEKM...VKQEKIKNGVILtAIGSVRGYQVHQVSNRDFP.
  81 ------------------------ALEAV...IHSQNCHAAFVLsGIGSLSTAGLRFAGADQ--.
  82 ------------LIRLEPGMDLMEEMRAA...FSE-----GVVVtGIGSLHRVRIRTADESE--.
  83 -----------------------------...------------.-----------WFDPNAKT.
  84 --------GRAFTLTMERGLPLLEAAHRG...FAAQGFAGGVLDiSAGALGPFAYVMPALSKTPd
  85 ---------------LVAGDDLFDSVTVL...LETLDVSGLMVEfLDGEFGRINYVYPAYGPDAe
  86 --------GRAFTFMLEAGVPLLEAARRG...FAAEGFAGGVLNfGRGTLGPFAYVMPALSKTGe
  87 --------GDLVVAQIRPNEDLVDTLERV...CAEHGVTSGRVLsLIGSTVGARFEGGPAID--.
  88 -------GGDLIVARVRPNEDLIEALEAI...AARHGVREGRILsLIGSTVGARFEDG------.
  89 ---------RAFALRLRPNQDFAFCLEGF...CREHGIARAKIHgGVGSTIGARFTHGGVTE--.
  90 --------------VLPAGAVLIEAVAAG...LAPLGLQSAALD.LRGLLIGPMNFVMPTYARTp
  91 -----------FALRLRPNQDFAACLEAF...CQAQGIREARIRgGVGSTIGARFASGEVVEP-.


                        70          80          90         100         
                        |           |           |           |         
   1 ....YVKKELM..EP....LEILSL..SGNVSMKD.SK.PFCHIHVLL.G.KDGEVYGGHLFSA.
   2 ....YIYISKD..EH....MEILNC..IGNISVKD.GK.PFPHVHITLaD.KNGNAYGGHLMEG.
   3 ....YVKKELM..EP....LEILSL..SGNVSMKD.SK.PFCHIHVLL.G.KDGEVYGGHLFSA.
   4 ....FFFKEID..EH....LEIVSC..KGNISLLN.GE.PFVHAHIIVsD.ENGNTYGGHLSEE.
   5 ....YIYISKD..EH....MEILNA..IGNISVKD.GK.PFAHVHITLaD.KNGNAFGGHLMEG.
   6 ppe.PVLIPLD..GA....HEVAGV..GIITPDES.GN.PKLHIHAAL.G.RMGKTTTGCLRPGv
   7 ....YEKKLID..EP....LELIGL..MGNISHID.EQ.PFAHLHATF.GtNQYETLSGHLTKA.
   8 ....YDSLTFD..EP....LEVAAC..MGNISHFD.GE.RFAHTHAVL.SrPDGEAVAGHLNAG.
   9 ppe.PVLIPLD..GA....HEVAGV..GIIAPGED.GT.PKLHIHAAL.G.RMGKTTTGCLRPGv
  10 ppe.PVLIPLD..GA....HEVAGV..GIIAPGED.GT.PKLHIHAAL.G.RMGKTTTGCLRPGv
  11 npvkPMIHELD..DA....HEITGS..GTLFPDDH.GN.PILHMHMAC.G.REENTVTGCIRNG.
  12 ....YESREVN..EA....LELTSL..LGNISHID.DK.PFAHLHGTF.GtRDFQTLSGHLTKA.
  13 ....YYPVEFD..EP....FEVTTA..LGNISHLD.GE.RFAHTHVTL.SrEDGSMVGGHLDSA.
  14 ....YKEISLT..GT....YELLSL..SGNISLKD.GK.PFVHAHVVL.GdSEGRAFGGHLVRG.
  15 ....PPETMWV..NH....TEPYEVigVGNIFMEE.GT.PKIHLHTAA.G.RGDNVNVGCLRGEs
  16 ypvnPMEHELY..DA....HEIVGT..GTLFPDDT.SA.PVVHLHMAC.G.REENTVTGCVRNG.
  17 ....YEFFSLD..TP....HEITSL..MGNISLRD.GE.PMVHAHVMLsD.EKGMVHGGHLAPG.
  18 ....YRELPFA..KP....LEIVSG..LGNISLRD.GR.PFVHLHLSIsD.EEGKVFGGHALEG.
  19 ....--TLTKR..EP....FEIVSV..MGTLTPEH.--.--QHVHISVsD.REGRVWGGHLLEG.
  20 ....FITLDLD..EP....MEILSG..LGNVSLKD.GK.PFVHAHVTFlD.RTGTIRGGHLLPG.
  21 ksisPMEHILD..DV....HEIAGV..GTIFPDKY.HN.PVLHMHIAC.G.REESTITGCVRRG.
  22 ....YLKNQVN..EQ....VEVVSL..IGDIALDK.GE.PKVHAHVVV.GkRNGSAMGGHLLEA.
  23 ....YTAAEFD..EP....LEVAAC..VGNIATLD.GE.PFAHTHATL.SrRSGQALAGHLERA.
  24 ....YKVIPLK..GS....YELISL..IGNVSLKD.GE.PFVHAHVSL.GnEEGIVFGGHLVEG.
  25 ....YRYSSIH..GG....REIVSL..TGNISLSE.GN.PMIHAHIALaD.REGRMNGGHLAPG.
  26 nppkPMTLELY..DA....HEITGT..GTLFPDSS.GK.PILHMHMAC.G.REENSVTGCARAG.
  27 ....YKEIQLK..GT....YELISL..LGNVSLKD.GK.PFLHAHVSL.GnDEGIVFGGHLVEG.
  28 ....YRSIELS..GT....FELLSL..NGNISLKD.GK.PFAHLHVTL.GdEEGRVFGGHLIRG.
  29 vpitPMYLELY..DA....HEVFGV..GTIFPDDT.GN.PVIHLHMAC.G.REENTVTGCIRNG.
  30 lpvmPMTHELY..DA....HEITGT..GTIFPDDK.GN.PVLHLHMAC.G.REENTVTGCVRNG.
  31 tpisPMELLLD..NA....HEVAGT..GTLFPDEE.GH.PLVHMHFAL.G.RKNQTVTGCIRKG.
  32 ....YEEKHIT..EP....LELTSL..LGNISRLD.NG.HFAHLHATF.GtQSYETFSGHLAKA.
  33 ....YEEKHIT..EP....LELTSL..LGNISRLD.NG.HFAHLHATF.GtQSYQTYSGHLSKA.
  34 ....YEEKHIT..EP....LELTSL..LGNISRLD.NG.HFAHLHATF.GtQSYETFSGHLAKA.
  35 ....YRHIPVR..EQ....CEVLSL..IGDIAVAD.DG.PTPHLHAVL.GlSDGSTRGGHLLSG.
  36 ....PPEPVWT..GF....SDAREIlgIGDIFQED.GE.PKIHLHAGT.A.RGDDIKLGCLRGEs
  37 ....PPEPVWT..GF....NDAHEIlgIGDIFQEN.GK.PKIHLHAGT.A.RENRIKLGCLRGEs
  38 ....PPEPVWS..GF....DDAHEIlgIGDIFLME.GK.PKIHLHAGA.G.RGDSVKLGCLRGEs
  39 ....YNEKQFK..GD....FEITSL..VGNVSTYK.DN.LIPHLHINL.GdKDFNVKGGHLQSA.
  40 ....--TLTKQ..EP....FEIVSV..MGTLTPEH.--.--QHVHISVsD.REGRVWGGHLMEG.
  41 ....--TLTKQ..EP....FEIVSV..MGTLTAEH.--.--QHVHISVsD.REGRVWGGHLLEG.
  42 ....YRKRSFE..GA....YEIASC..TGNISLKD.GE.RFIHAHIVLaD.ENYNLIGGHLLGG.
  43 ....YEEIPVG..EQ....AEVLTL..VGNIASFR.GE.PRPHLHAVL.GrRDGSTVGGHLLEA.
  44 ....--PTELR..DD....LEILTL..AGSISPDG.--.--AHLHMSVaD.PRGQVSGGHVARG.
  45 ....--TKLIK..AP....FEIVSV..MATLTPNH.--.--QHIHISVaD.ENGDVIGGHLLEG.
  46 ....--TLQVS..AP....FEILSL..SGTLTYQH.--.--CHLHIAVaD.AQGRVWGGHLLEG.
  47 ....FDPKTYR..N-....VEMANM..TGSIAWKE.GK.PSIHAHGTVtD.GTFQGAGGHLLGL.
  48 ....--PAELR..DD....LEILTL..AGTLSADG.--.--AHLHMSVaD.SRGRVFGGHVAHG.
  49 ....--PTELR..GD....LEILTL..AGSVSPDG.--.--AHLHMSIsD.ADGRVTGGHVARG.
  50 ....--PAELH..GD....LEILTL..AGSVSPDG.--.--AHLHMTVaD.ASGRVSGGHVASG.
  51 ....--EFQQK..AC....FEIVAI..TATLTPEH.--.--QHVHLAIaD.EHGRVYGGHLLEG.
  52 ....PPEPVWQrlET....ARETLG..SGSIFWDE.EA.PKIHFHAAL.G.HHGDTITACVRKG.
  53 i6arVNTHLLE..GP....LELLSL..TGNIVPDEtNT.PDCHLHIMA.GkSSCDVIGGHLFDA.
  54 ....--VVEFQ..GP....FEIVSL..SGTLGPDG.--.--AHLHMAI.SnYEGQVIGGHLMDG.
  55 ....--TKLIT..AP....FEIVSL..MATLTPNH.--.--QHVHISVaD.ENGDVIGGHLLEG.
  56 ....YDDKTFR..EQ....MEISNL..TGNISSMN.EQ.VYLHLHITV.GrSDYSALAGHLLSA.
  57 ....--PTELR..GD....LEILTL..AGSVSPDG.--.--AHLHMSVsD.VVGRVSGGHVASG.
  58 ....--SLTLD..GP....LEILTL..SGTLTADH.--.--VHLHISVaD.KEGRVFGGHLMDG.
  59 ....--IIEVS..GP....LEILTL..SGTLTPQH.--.--VHLHISVaD.KKGQVIGGHLVDG.
  60 ....YQEIPVA..EQ....SEVLTL..LGDITLDE.NGvPNPHLHVVL.GfADGSTRGGHFLKG.
  61 ....--PTELR..GD....LEILTL..AGSVSPDG.--.--AHLHMSVsD.AQGRVSGGHVASG.
  62 ....--EFQQK..AC....FEIIAI..TATLTPEH.--.--QHVHLAIaD.EHGRVYGGHLLEG.
  63 ....YRKIPVA..EQ....SEVLSA..IGDIARDEaGS.PSLHLHAVL.GlEDGSTRGGHLLEG.
  64 ....--TIEVL..GP....LEILTL..SGTLTPQH.--.--VHLHISVaD.KKGQVIGGHLVDG.
  65 ....YEKETFR..ER....LEIVSL..HGTIAEND.PK.YHIHASGAR.S.NHMIVGGHLFSAT.
  66 ....YEKETFR..ER....LEIVSL..HGTIAEND.PK.YHIHASGAR.S.NHMIVGGHLFSAT.
  67 qgivPMLHTLR..GV....HEVLAV..GTLFPDDA.GV.PVLHLHAAA.G.REDKVAVGCARAG.
  68 ....YVETRSQ..EQ....VELLSL..SGNVENAD.GK.ISTHLHASF.ArLDTSVFGGHLERA.
  69 ....--SLTLD..GP....LEILTL..SGTLTADH.--.--VHLHISVaD.KEGRVFGGHLMDG.
  70 ....YEKETFR..ER....LELVSL..HGSIAEND.PR.FHIHAAGAR.G.NHGIVGGHLFSAK.
  71 ....--PLQLE..AP....VEILSL..CGSLSLAG.--.--AHLHMSIaD.AQGRVLGGHVAAG.
  72 ....YQEIPVA..EQ....SEVLTL..LGDITLDE.NGvPNPHLHVVL.GfADGSTRGGHFLKG.
  73 ....FLVIPL-..DT....VEITSF..TGDIAWYN.GK.PVAHTHVSA.SlKDGSVKGGHLLKL.
  74 e7yySETYFRD..GP....VTIEEG..TATYGSRD.GR.PFLHGHVLWhD.EDGTQRGGHILPF.
  75 ....--ASVQN..EP....LELITL..SGTLSPDG.--.--VHLHASVaD.ARGEMRGGHVMPG.
  76 i6arMTVHDVE..GP....LELLGL..EGNMVPNDqGQ.CDCHLHILM.SrSSGEVIGGHLFDA.
  77 ....YDELLIE..DR....SELVAF..HGSIANDK.NR.FHIHIGVAR.K.DHGLYGGHFFSGI.
  78 ....--PTELR..GD....LEILTL..AGSVSPDG.--.--AHLHMSVsD.ADGRVTGGHVASG.
  79 ....YYTVDVK..PPegrvIEVAAM..TGNIVKTS.QG.YSVHIHVAL.GvSPGKSISGHLVKG.
  80 ....SKNMFVK..DP....TAPADL..IGMSGFIM.NG.Q-LHPHITL.S.NPERAFGGHLEPG.
  81 ....--PERLT..GD....IQILSL..SGTVAFDG.VK.SSSHLHMAL.StSTGQVPGGYIPAG.
  82 ....---LTVE..GP....LEILSL..QGTISPDG.--.--VHIHIAVaD.SEGRVTGGHLRGD.
  83 ....YRKIPID..EQ....CEVLSA..IGDVALGDdGK.PSLHVHTVL.GlSDGTTRGGHLLQA.
  84 h6fySETHRPS..GV....TQLSTA..TMTLGVRD.GA.PFFHCHALWmE.EGGRNGGGHILPE.
  85 h6sfTTEFRHE..GP....AVLRHA..SATVGTKN.GE.PFAHIHASWlT.EEGLAEGGHLLPG.
  86 naafYSETFRP..EG....VTRTKLg.RMTLGTRD.GA.PFFHCHGLWtE.ADGKASGGHMLPD.
  87 ....------E..VP....TEILGL..KGSIGTDGvGR.PRLELEIA-.-.-------------.
  88 ....--LAIDE..VP....TEILGL..NGRFGGDAaGG.TRLDLEIALiD.ALGRIHRGRPSRG.
  89 ....-------..--....------..--------.--.---------.-.-------------.
  90 d7yySETHHRP..GP....VRVDTG..TATYGARD.GA.PFLHGHVLWqD.ADGTAMGGHVLPL.
  91 ....-------..FA....TELTIT..AGVIAPGA.DG.LEAVLDVALvD.YTGALAQGRLVRGd


      110              120            130       140      
       |                |              |         |      
   1 .EVF...ACEVFVLP....LSGEA...P..ERAFDEQTGLFLWLEHHHHHH
   2 .TKVf..AAEFVIVD....YGDSK...L..ERVYDETTGLQLWD-------
   3 .EVF...ACEVFVLP....LSGEA...P..ERAFDEQTGLFLW--------
   4 .TTIf..AAEYFIQE....LIGEK...L..ERTFDKKTGLSLW--------
   5 .TIIf..AAEFVITD....YGDNN...L..ERVYDKTTGLQLWN-------
   6 nTWI...VGEAVMYE....ILGAK...A..IRRFDEKTQFSLLQP------
   7 .VVS...ATAEIIIT....MTNLD...I..NRKHNETIGLNLLD-------
   8 .TVW...-AGELYVR....GFDTE...L..QREHDEPTDLDLWN-------
   9 nTWI...VGEAVMYE....ILGAK...A..VRRFDETTKFNLL--------
  10 nTWI...VGEAVMYE....ILGAK...A..VRRFDEATKFNLL--------
  11 .VKVwq.VMEIILTE....LLECT...A..RRLYDPNTGFKLL--------
  12 .VVS...ATAEIVIQ....MTNLD...V..NRTHDEETGLNLL--------
  13 .TTF...-AGELYVR....TFDAH...L..EREHDETTDLDLW--------
  14 .EVF...VAEVFVQE....LEGET...L..ERKP-----------------
  15 aAFM...VLEVFIME....INGME...A..MRAFDAAKGFAPISF------
  16 .VKVwh.VMEVILVE....LLGTQ...A..RRLPDKATGFKLL--------
  17 .TIVf..ACELIIEA....FDGPE...L..NRGMDKETGLPLW--------
  18 .CTIf..AAEYAIMP....LPGSA...P..VRVFDETTGLFLWEREQ----
  19 .TVIdt.TAELIIHS....YSELE...F..TRAMDDSTGYTELQV------
  20 .TIV...FAGEVFIE....ELELP...AppERVDDPVTGLSLW--------
  21 .VKVwh.LLEVILIE....LMDSK...A..RRVFDEQLGFALL--------
  22 .HVR...PTLELVLQ....DSGEQ...L..KRKFDPESGLALIDL------
  23 .TVF...-AGELYVR....ELDAD...L..VREHDAATDLDR---------
  24 .EVF...VAEIFLQE....LKGEK...I..ERKP-----------------
  25 .TTV...FACEYLIEefssVGGTP...L..SRSPDRETGLLLWG-------
  26 .VKVwh.VMEVVLTE....LLDTE...A..RRMVDPVTGFELL--------
  27 .EVF...VAEVYIQE....IKGEK...L..ERKPRD---------------
  28 .EVF...VAEVYIEE....LIGKP...L..ER-------------------
  29 .VKVwl.VMEVILTE....LLDTS...A..SRIMDQESGFKLL--------
  30 .VLVwh.VMEVILTE....LLENS...A..SRQPDPLTGFKLL--------
  31 .VKVwh.ILEVIVFE....LLDTS...A..HREADPVLGFKLLQP------
  32 .IVS...ATAEIILT....VTDLD...I..QRSFKDAVGLNLLDP------
  33 .IVS...ATAEIVLT....VTDMD...I..QRTFNDSVGLNLLDP------
  34 .IVS...ATAEIILT....VTDWD...I..QRSFNDAVGLNLLD-------
  35 .RVW...PTLEVVVR....DSPAE...L..AKIHRPDIGLALID-------
  36 eVF-m..VVEVFIFE....LEGIS...A..RRIMDPEQGFAPVSFIQI---
  37 eVF-m..VVEVFIFE....LEGIS...A..RRIMDPEQGFSPV--------
  38 eVF-m..VVEAFVFE....LEGFS...A..RRIADKEQGFAPVGFE-----
  39 .IIS...VTGEIFLE....PIGAT...L..EKEIDEDTGIKILN-------
  40 .TVIdt.TAELIIHS....YSELE...F..TRAMDNSTGYTELQV------
  41 .TVIdt.TAELIIHS....YSELE...F..TRAMDDSTGYTELQV------
  42 .RIF...AAELHITD....LEEKA...H..VRDYDPVTGLFLW--------
  43 .RVR...PILEVVIT....ESPGH...L..RRETDEETGLPLLSP------
  44 .CVIrt.TAEILLVL....LPDYR...F..SRERDPGSGFMELVIRN----
  45 .TIIat.TAELIVHR....YDTLT...F..NREHDDSTGYTELTI------
  46 .NLInt.TAELMIHH....YPQHH...F..TREFDPNTGYSEL--------
  47 .TVGt..GSCEITVT....VYPQR...L..DRFVDPEIQANVLGL------
  48 .CLVrt.TAEILLAI....LPEHR...F..SREYDARSGFAELAIR-----
  49 .CVVrt.TAEILLAL....LSAHR...F..SREPDAGTGFNELVIR-----
  50 .CVVrt.TVELLVAS....LPAHR...F..SRERDARTGFDELVI------
  51 .CLVdt.TVEVIVHA....YPALY...F..ERAWDEKTGYTELVI------
  52 .TTTyl.VLEVCIME....ISGLE...A..SRPWYPEGGFNRL--------
  53 .RVFa..TCEIVLTE....LVVEG...V..ERHHSTSGGIPTIYF------
  54 .SVIht.TAEIVLLE....NHDLT...F..HREVDGHTQYKELVI------
  55 .TIIat.TAELIIHR....YDTLT...F..NREHDDSTGYTELT-------
  56 .IQN...GAGEFVVE....DYSER...I..SRTYNPDLGLNIYDF------
  57 .CVVrt.TAEILLAV....LPAHR...F..AREPDPHTGFNELVIRRE---
  58 .SVVsy.TAEICLLS....FTEQH...F..SRKYDAETGFDELVVN-----
  59 .SIVsy.TAEICIAS....YTNLS...F..SREYDQLTRFDELK-------
  60 .LVR...PTLEVVIR....ETPAE...L..RRSYNREFGIALIDP------
  61 .CVVrt.TAEILLVL....LPAHR...F..SREPDAGTGFNELVI------
  62 .CVVdt.TVELIVHA....YPTLY...F..ERAWDEKTGYTEL--------
  63 .YVR...PTLEVIIR....ESPTG...L..CRRKRPELGIALIE-------
  64 .SIVsy.TAEICIAS....YTNLS...F..SREYDELTLFDELKI------
  65 .VDP...LIEIQIMK....IEGPK...M..TRVQDPSDKLFKLK-------
  66 .VDP...LIEIQIMK....IEGPK...M..TRVQDPSDKLFKLK-------
  67 .VKVwl.VGEVVLLE....IAGIE...G..RR--EKERGFSLLRF------
  68 .VIS...RTGELVIS....IVPLA...V..GRILHQPTQLQVLD-------
  69 .SDVsy.TAEICLLS....FIEQH...F..SREYDAATGFDEL--------
  70 .VDP...LVEIQIMK....ITGFS...M..SRELDNSDGLYKL--------
  71 .CEVrt.TVELLVEV....LEDLR...F..ERMADARTGYPELRI------
  72 .LVR...PTLEVVIR....ETPAE...L..RRSYNREFGIALIDP------
  73 .IVG...PTLEVMVT....VEPTP...L..YKRLNESFNAAVIDPEIT---
  74 .DCRigrDCEIAYVG....SQDIA...M..EARFDPETNFTLFGPQAVN--
  75 .CSVrt.TAEIVLAL....LPGWA...F..SRAHDDRSGFMEL--------
  76 .RVFa..SCEIILSE....FHGAG...V..ERHMSQSGGISTI--------
  77 .ADP...LMEVKITK....FDNIE...F..TRKYNPESTLNELE-------
  78 .CVVrt.TAEILLAL....LPAHR...F..SREPDAGTGFNELVI------
  79 .VVKp..FMEVFVVE....L----...-..---------------------
  80 .TTV...FTFVAI--....-----...-..---------------------
  81 .CIVr..TTAEVLVL....LLEWA...F..SREPDALTGF-----------
  82 .SPVrt.TAEIAVIP....YQG-V...L..RRVMDRRTGYREL--------
  83 .MVR...PTLEVTLV....EAPGH...L..RRTRRPELGVALID-------
  84 .ETV...VAEPFEVE....AFGLDgaiF..AAEPDPETGFKLFG-------
  85 .TLVgpkGMRLRVFA....LADAQ...Q..LSETDRETGFFAF--------
  86 .ETIvtePFEVEAFG....LDGAM...F..TAEPDPETNFKLFG-------
  87 .---...--------....-----...-..---------------------
  88 .---...--------....-----...-..---------------------
  89 .---...--------....-----...-..---------------------
  90 .ECR...IAEDCTIG....FAGARevaM..EARPDAETNFTLFG-------
  91 .---...--------....-----...-..---------------------