Best Alignments for T0312

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xv2A/T0312-1xv2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xv2A/T0312-1xv2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9318e-041.56e-12
1ys7A/T0312-1ys7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ys7A/T0312-1ys7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2692e+004.79e-05
2al3A/T0312-2al3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al3A/T0312-2al3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9862e+003.44e-06
1wrvA/T0312-1wrvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wrvA/T0312-1wrvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7099e+002.00e-07
1c1yB/T0312-1c1yB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c1yB/T0312-1c1yB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3719e+001.42e-05 1c1yB d.15.1.5
2gnxA/T0312-2gnxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gnxA/T0312-2gnxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1948e+012.18e-03
1fukA/T0312-1fukA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fukA/T0312-1fukA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6025e+011.67e-05 1fukA c.37.1.19
1iyeA/T0312-1iyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iyeA/T0312-1iyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1132e+014.75e-05 e.17.1.1
1w41A/T0312-1w41A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w41A/T0312-1w41A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2321e+012.20e-05
1wn2A/T0312-1wn2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wn2A/T0312-1wn2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4594e+012.99e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001