Best Alignments for T0312

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xv2A/T0312-1xv2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xv2A/T0312-1xv2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8491e-041.04e-13
2al3A/T0312-2al3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al3A/T0312-2al3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4610e+001.70e-07
1c1yB/T0312-1c1yB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c1yB/T0312-1c1yB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6855e+001.14e-05 1c1yB d.15.1.5
1hskA/T0312-1hskA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hskA/T0312-1hskA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9598e+003.74e-11 2mbr d.145.1.2
d.146.1.1
1m1hA/T0312-1m1hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m1hA/T0312-1m1hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4857e+007.60e-11 b.114.1.1
d.58.42.1
1ys7A/T0312-1ys7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ys7A/T0312-1ys7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1518e+001.46e-04
1wrvA/T0312-1wrvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wrvA/T0312-1wrvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3615e+007.21e-07
1i1kA/T0312-1i1kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i1kA/T0312-1i1kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3320e+011.42e-05 1daaA e.17.1.1
1cr1A/T0312-1cr1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cr1A/T0312-1cr1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3547e+018.91e-09 1cr1A c.37.1.11
1n6aA/T0312-1n6aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n6aA/T0312-1n6aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4584e+011.17e-09 b.76.2.1
b.85.7.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001