Best Alignments for T0309

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1hyuA/T0309-1hyuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hyuA/T0309-1hyuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0164e+001.68e-01 1hyuA c.3.1.5
c.3.1.5
c.47.1.2
c.47.1.2
2bdtA/T0309-2bdtA-t2k-global-adpstyle1.a2m 2bdtA/T0309-2bdtA-t2k-global-adpstyle1.al 3.3361e+002.27e-05
2bdqA/T0309-2bdqA-t2k-global-adpstyle1.a2m 2bdqA/T0309-2bdqA-t2k-global-adpstyle1.al 4.5842e+005.99e-04
2d1uA/T0309-2d1uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d1uA/T0309-2d1uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1474e+004.12e-03
1zynA/T0309-1zynA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zynA/T0309-1zynA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2697e+006.07e+00
1souA/T0309-1souA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1souA/T0309-1souA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9233e+001.46e+00 c.124.1.6
1tzaA/T0309-1tzaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tzaA/T0309-1tzaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0049e+001.90e-04 b.1.23.1
1esfA/T0309-1esfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1esfA/T0309-1esfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0163e+019.54e+00 3seb b.40.2.2
d.15.6.1
2fvtA/T0309-2fvtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fvtA/T0309-2fvtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0253e+019.70e-02
1tf7A/T0309-1tf7A-t2k-local-adpstyle1.a2m 1tf7A/T0309-1tf7A-t2k-local-adpstyle1.al 1.1248e+014.14e-01 c.37.1.11
c.37.1.11

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001