PFRMAT RR
TARGET T0309
AUTHOR 5370-1100-4902
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa5str2_5near5nsep5.entmi_epplcc.th62.47.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MASKKVHQINVKGFFDMDVMEVTEQTKEAEYTYDFKEILSEFNGKNVSIT
VKEENELPVKGVEMAGDPLEHHHHHH
3 14 0 8 0.0324875958615
3 15 0 8 0.033389366728
3 17 0 8 0.0293653106071
3 19 0 8 0.0292819355943
4 14 0 8 0.0390467012899
4 15 0 8 0.040479333192
4 16 0 8 0.0303613541179
4 17 0 8 0.0352198435021
4 19 0 8 0.0349147098227
4 22 0 8 0.0348424926832
5 14 0 8 0.0392327742799
5 15 0 8 0.040207055058
5 16 0 8 0.0310222385349
5 17 0 8 0.0350480838191
5 18 0 8 0.0296338802934
5 19 0 8 0.0345009251316
5 22 0 8 0.0337839585757
6 15 0 8 0.0800270002242
6 17 0 8 0.0675874352972
6 19 0 8 0.0658717902808
6 20 0 8 0.0427954864943
6 22 0 8 0.0719393312071
6 23 0 8 0.032411897986
6 26 0 8 0.0401270306602
6 29 0 8 0.0401540307619
6 31 0 8 0.0441780218223
6 32 0 8 0.0293340165134
6 33 0 8 0.0315850767994
6 35 0 8 0.0492276914447
6 38 0 8 0.046731971201
6 47 0 8 0.045803232763
6 48 0 8 0.0316123696733
6 49 0 8 0.0523743418511
6 50 0 8 0.0384289519751
6 51 0 8 0.0586364136305
6 59 0 8 0.0395584020124
6 61 0 8 0.0300467541377
6 62 0 8 0.0466786216024
6 64 0 8 0.0390499543142
7 16 0 8 0.0607977229761
7 17 0 8 0.0729119854731
7 18 0 8 0.0562903325046
7 19 0 8 0.0706377961842
7 20 0 8 0.0456890516101
7 22 0 8 0.0765205653302
7 23 0 8 0.0354651215344
7 26 0 8 0.0431432347921
7 29 0 8 0.0417216631726
7 31 0 8 0.0451448206445
7 32 0 8 0.0311831981773
7 33 0 8 0.030845696906
7 35 0 8 0.0447746264791
7 38 0 8 0.0398316560537
7 47 0 8 0.0472797804933
7 48 0 8 0.0337419945622
7 49 0 8 0.0546800854756
7 50 0 8 0.0429740775285
7 51 0 8 0.0626070550923
7 59 0 8 0.0405258514395
7 61 0 8 0.0315503019696
7 62 0 8 0.0475891431043
7 64 0 8 0.0392535936354
8 59 0 8 0.0323633953937
8 62 0 8 0.0380122395621
9 19 0 8 0.0841202807022
9 20 0 8 0.054238650078
9 22 0 8 0.0867191218163
9 23 0 8 0.0387851581361
9 26 0 8 0.0475133476381
9 29 0 8 0.0466565010372
9 31 0 8 0.0505324794919
9 32 0 8 0.033575439718
9 33 0 8 0.0343747077887
9 35 0 8 0.0482238081454
9 38 0 8 0.0449951815267
9 39 0 8 0.0308710704956
9 47 0 8 0.0592967775636
9 48 0 8 0.0414480838289
9 49 0 8 0.0654199452054
9 50 0 8 0.0518232795345
9 51 0 8 0.0738680493151
9 57 0 8 0.0310839809361
9 59 0 8 0.0485204839617
9 61 0 8 0.0378935041751
9 62 0 8 0.0577870489855
9 64 0 8 0.0427421368958
10 46 0 8 0.030615708088
10 47 0 8 0.0454863881961
10 48 0 8 0.0349160110324
10 49 0 8 0.0445670835287
10 50 0 8 0.0399887771274
10 51 0 8 0.0467742605169
10 52 0 8 0.0308684030157
10 59 0 8 0.0363649080561
10 61 0 8 0.0335155840709
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10 63 0 8 0.0346882993314
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11 20 0 8 0.0722360070233
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11 32 0 8 0.0458822812536
11 33 0 8 0.0504869371516
11 34 0 8 0.036030497158
11 35 0 8 0.0689676935081
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11 53 0 8 0.0351476263627
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11 62 0 8 0.0656870185005
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11 64 0 8 0.0556156552646
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12 21 0 8 0.0396114263085
12 22 0 8 0.0622954153643
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12 25 0 8 0.0342162855053
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12 35 0 8 0.0371736098973
12 46 0 8 0.0299806526839
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14 32 0 8 0.0555353055644
14 33 0 8 0.0496635967011
14 34 0 8 0.0367107045393
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14 38 0 8 0.0600521298063
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14 46 0 8 0.0401325608015
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14 48 0 8 0.0469515503413
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15 24 0 8 0.056132560826
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15 36 0 8 0.0372523330854
15 37 0 8 0.0372357426615
15 38 0 8 0.0770446275451
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15 63 0 8 0.055001809579
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15 69 0 8 0.0388043509794
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16 25 0 8 0.0508112636744
16 26 0 8 0.0592326929849
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END