Best Alignments for T0308

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1o3yA/T0308-1o3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o3yA/T0308-1o3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7653e-191.32e-83 c.37.1.8
2bcgY/T0308-2bcgY-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcgY/T0308-2bcgY-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7420e-191.80e-83
2a5dA/T0308-2a5dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a5dA/T0308-2a5dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3309e-186.20e-85
2bmeA/T0308-2bmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bmeA/T0308-2bmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7396e-183.00e-82
2f9lA/T0308-2f9lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f9lA/T0308-2f9lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9608e-181.29e-82
2a5jA/T0308-2a5jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a5jA/T0308-2a5jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7024e-184.84e-81
2b6hA/T0308-2b6hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b6hA/T0308-2b6hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8542e-188.13e-80
2gf9A/T0308-2gf9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf9A/T0308-2gf9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9219e-182.53e-81
1z0jA/T0308-1z0jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z0jA/T0308-1z0jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8263e-181.10e-82
1oixA/T0308-1oixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oixA/T0308-1oixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1002e-183.35e-78

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001