Best Alignments for T0308

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1d5cA/T0308-1d5cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5cA/T0308-1d5cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3000e-252.15e-84 1ctqA c.37.1.8
2a5dA/T0308-2a5dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a5dA/T0308-2a5dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8969e-218.25e-87
2bcgY/T0308-2bcgY-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcgY/T0308-2bcgY-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0702e-203.20e-87
1x3sA/T0308-1x3sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x3sA/T0308-1x3sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4682e-201.99e-86
1yzgA/T0308-1yzgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yzgA/T0308-1yzgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6474e-202.93e-83
1z0jA/T0308-1z0jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z0jA/T0308-1z0jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6114e-203.06e-91
2b6hA/T0308-2b6hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b6hA/T0308-2b6hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7068e-209.20e-83
2bmeA/T0308-2bmeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bmeA/T0308-2bmeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0267e-191.07e-88
2a5jA/T0308-2a5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a5jA/T0308-2a5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2417e-193.53e-88
2f9lA/T0308-2f9lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f9lA/T0308-2f9lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2738e-199.66e-89

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001