Best Alignments for T0307

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2aaoA/T0307-2aaoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aaoA/T0307-2aaoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6399e-014.57e-14
1a2xA/T0307-1a2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a2xA/T0307-1a2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6406e-017.87e-09 1ncx a.39.1.5
2ccmA/T0307-2ccmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ccmA/T0307-2ccmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6036e-013.46e-10
1mvwB/T0307-1mvwB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mvwB/T0307-1mvwB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2399e-014.00e-07 i.15.1.1
1pvaA/T0307-1pvaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pvaA/T0307-1pvaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1633e+001.68e-07 1a75A a.39.1.4
1jk0A/T0307-1jk0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jk0A/T0307-1jk0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2189e+002.31e-06 a.25.1.2
1afvA/T0307-1afvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1afvA/T0307-1afvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3422e+004.23e-15 1ak4C a.73.1.1
1jipA/T0307-1jipA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jipA/T0307-1jipA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4434e+001.87e-07 a.104.1.1
1go3F/T0307-1go3F-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1go3F/T0307-1go3F-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4746e+001.28e-08 a.60.8.2
1yqyA/T0307-1yqyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yqyA/T0307-1yqyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7945e+003.16e-08

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001