Best Alignments for T0306

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ae0X/T0306-2ae0X-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ae0X/T0306-2ae0X-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1432e-013.34e-06
2gaeA/T0306-2gaeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gaeA/T0306-2gaeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7001e-011.98e-04
2c3mA/T0306-2c3mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3mA/T0306-2c3mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4960e+002.83e-03
1pgl1/T0306-1pgl1-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pgl1/T0306-1pgl1-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0089e+016.31e-01
1v04A/T0306-1v04A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v04A/T0306-1v04A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0871e+012.85e-04 b.68.6.2
1wucA/T0306-1wucA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wucA/T0306-1wucA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1121e+016.80e+00
1sq9A/T0306-1sq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sq9A/T0306-1sq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8224e+013.81e+01 b.69.4.1
1wi1A/T0306-1wi1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wi1A/T0306-1wi1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1161e+011.02e-02
1i0lA/T0306-1i0lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i0lA/T0306-1i0lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2558e+011.60e-01 c.61.1.1
1zd0A/T0306-1zd0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zd0A/T0306-1zd0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3872e+015.19e+01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001