Best Alignments for T0306

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ae0X/T0306-2ae0X-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ae0X/T0306-2ae0X-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7188e+003.23e-06
1hxmA/T0306-1hxmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hxmA/T0306-1hxmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3000e+006.71e+01 1hxmA b.1.1.1
b.1.1.2
2gaeA/T0306-2gaeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gaeA/T0306-2gaeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8154e+001.66e-04
2c3mA/T0306-2c3mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3mA/T0306-2c3mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2661e+004.26e-03
1b0pA/T0306-1b0pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b0pA/T0306-1b0pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0578e+001.46e-03 c.36.1.8
c.36.1.12
c.48.1.3
c.64.1.1
d.58.1.5
1xpkA/T0306-1xpkA-t04-local-adpstyle1.a2m 1xpkA/T0306-1xpkA-t04-local-adpstyle1.al 1.3724e+011.27e+00
1v04A/T0306-1v04A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v04A/T0306-1v04A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4164e+015.34e-04 b.68.6.2
1g0uI/T0306-1g0uI-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g0uI/T0306-1g0uI-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7400e+018.58e-02 d.153.1.4
1wucA/T0306-1wucA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wucA/T0306-1wucA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6183e+018.18e+00
1wi1A/T0306-1wi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wi1A/T0306-1wi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6210e+011.46e-02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001