Best Alignments for T0305

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fh7A/T0305-2fh7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fh7A/T0305-2fh7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7389e-511.85e-179
1pa1A/T0305-1pa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pa1A/T0305-1pa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1797e-452.35e-165 c.45.1.2
2f71A/T0305-2f71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f71A/T0305-2f71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0348e-453.97e-165
2b49A/T0305-2b49A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b49A/T0305-2b49A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2099e-441.95e-165
2bzlA/T0305-2bzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bzlA/T0305-2bzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8334e-431.57e-158
1wchA/T0305-1wchA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wchA/T0305-1wchA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7840e-422.77e-160
2bv5A/T0305-2bv5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bv5A/T0305-2bv5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6080e-424.96e-157
1larA/T0305-1larA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1larA/T0305-1larA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9369e-361.09e-180 1larA c.45.1.2
c.45.1.2
2b3oA/T0305-2b3oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b3oA/T0305-2b3oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2511e-334.55e-157
2shpA/T0305-2shpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2shpA/T0305-2shpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6101e-326.13e-158 2shpA c.45.1.2
d.93.1.1
d.93.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001