Best Alignments for T0305

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fh7A/T0305-2fh7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fh7A/T0305-2fh7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4289e-561.85e-179
2f71A/T0305-2f71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f71A/T0305-2f71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7316e-493.97e-165
1pa1A/T0305-1pa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pa1A/T0305-1pa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5000e-492.35e-165 c.45.1.2
2b49A/T0305-2b49A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b49A/T0305-2b49A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1529e-487.09e-164
1wchA/T0305-1wchA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wchA/T0305-1wchA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1522e-472.77e-160
2bzlA/T0305-2bzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bzlA/T0305-2bzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5233e-463.95e-154
2bv5A/T0305-2bv5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bv5A/T0305-2bv5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3343e-451.22e-154
1g4wR/T0305-1g4wR-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g4wR/T0305-1g4wR-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8814e-197.23e-72 1g4uS a.24.11.1
c.45.1.2
1oheA/T0305-1oheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oheA/T0305-1oheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2769e-141.33e-43 c.45.1.1
c.45.1.1
1rxdA/T0305-1rxdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxdA/T0305-1rxdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5560e-111.13e-39

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001