/projects/compbio/experiments/protein-predict/casp7/starter-directory/Make.main:2040: Hello here find decoys/servers -type f -print \ | xargs /projects/compbio/experiments/protein-predict/casp7/scripts/rosetta_score.pl -v > decoys/servers.rosetta.rdb setting up rosetta working directory in /tmp/rosetta_score-30884-862978382...done running rosetta on decoys/servers/3D-JIGSAW_POPULUS_TS4.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_POPULUS_TS5.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_RECOM_TS1.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_RECOM_TS3.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_RECOM_TS4.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_RECOM_TS5.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_TS1.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_TS2.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_TS3.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_TS5.pdb.gz...done running rosetta on decoys/servers/3Dpro_TS1.pdb.gz...done running rosetta on decoys/servers/3Dpro_TS2.pdb.gz...done running rosetta on decoys/servers/3Dpro_TS3.pdb.gz...done running rosetta on decoys/servers/3Dpro_TS4.pdb.gz...done running rosetta on decoys/servers/3Dpro_TS5.pdb.gz...done running rosetta on decoys/servers/ABIpro_TS1.pdb.gz...done running rosetta on decoys/servers/ABIpro_TS3.pdb.gz...done running rosetta on decoys/servers/ABIpro_TS4.pdb.gz...done running rosetta on decoys/servers/ABIpro_TS5.pdb.gz...done running rosetta on decoys/servers/BayesHH_TS1.pdb.gz...done running rosetta on decoys/servers/beautshotbase_TS1.pdb.gz...done running rosetta on decoys/servers/Bilab-ENABLE_TS2.pdb.gz...done running rosetta on decoys/servers/Bilab-ENABLE_TS3.pdb.gz...done running rosetta on decoys/servers/Bilab-ENABLE_TS4.pdb.gz...done running rosetta on decoys/servers/Bilab-ENABLE_TS5.pdb.gz...done running rosetta on decoys/servers/CaspIta-FOX_TS1.pdb.gz...done running rosetta on decoys/servers/CaspIta-FOX_TS3.pdb.gz...done running rosetta on decoys/servers/CaspIta-FOX_TS4.pdb.gz...done running rosetta on decoys/servers/CIRCLE_TS1.pdb.gz...done running rosetta on decoys/servers/CIRCLE_TS2.pdb.gz...done running rosetta on decoys/servers/CIRCLE_TS3.pdb.gz...done running rosetta on decoys/servers/CIRCLE_TS4.pdb.gz...done running rosetta on decoys/servers/CPHmodels_TS1.pdb.gz...done running rosetta on decoys/servers/Distill_TS1.pdb.gz...done running rosetta on decoys/servers/Distill_TS2.pdb.gz...done running rosetta on decoys/servers/Distill_TS3.pdb.gz...done running rosetta on decoys/servers/Distill_TS4.pdb.gz...done running rosetta on decoys/servers/FAMSD_TS1.pdb.gz...done running rosetta on decoys/servers/FAMSD_TS2.pdb.gz...done running rosetta on decoys/servers/FAMSD_TS3.pdb.gz...done running rosetta on decoys/servers/FAMSD_TS4.pdb.gz...done running rosetta on decoys/servers/FAMSD_TS5.pdb.gz...done running rosetta on decoys/servers/FAMS_TS3.pdb.gz...done running rosetta on decoys/servers/FAMS_TS4.pdb.gz...done running rosetta on decoys/servers/FAMS_TS5.pdb.gz...done running rosetta on decoys/servers/FOLDpro_TS1.pdb.gz...done running rosetta on decoys/servers/FOLDpro_TS4.pdb.gz...done running rosetta on decoys/servers/FOLDpro_TS5.pdb.gz...done running rosetta on decoys/servers/forecast-s_AL1.pdb.gz...done running rosetta on decoys/servers/FPSOLVER-SERVER_TS3.pdb.gz...done running rosetta on decoys/servers/FPSOLVER-SERVER_TS4.pdb.gz...done running rosetta on decoys/servers/FUGMOD_TS1.pdb.gz...done running rosetta on decoys/servers/FUGMOD_TS2.pdb.gz...done running rosetta on decoys/servers/FUGMOD_TS3.pdb.gz...done running rosetta on decoys/servers/FUGMOD_TS4.pdb.gz...done running rosetta on decoys/servers/FUGMOD_TS5.pdb.gz...done running rosetta on decoys/servers/FUNCTION_TS2.pdb.gz...done running rosetta on decoys/servers/FUNCTION_TS3.pdb.gz...done running rosetta on decoys/servers/FUNCTION_TS4.pdb.gz...done running rosetta on decoys/servers/FUNCTION_TS5.pdb.gz...done running rosetta on decoys/servers/GeneSilicoMetaServer_TS3.pdb.gz...done running rosetta on decoys/servers/GeneSilicoMetaServer_TS4.pdb.gz...done running rosetta on decoys/servers/GeneSilicoMetaServer_TS5.pdb.gz...done running rosetta on decoys/servers/gtg_AL1.pdb.gz...done running rosetta on decoys/servers/gtg_AL2.pdb.gz...done running rosetta on decoys/servers/HHpred2_TS1.pdb.gz...done running rosetta on decoys/servers/Huber-Torda-Server_TS1.pdb.gz...done running rosetta on decoys/servers/Huber-Torda-Server_TS3.pdb.gz...done running rosetta on decoys/servers/Huber-Torda-Server_TS4.pdb.gz...done running rosetta on decoys/servers/karypis.srv.2_TS1.pdb.gz...done running rosetta on decoys/servers/karypis.srv.2_TS2.pdb.gz...done running rosetta on decoys/servers/karypis.srv.2_TS3.pdb.gz...done running rosetta on decoys/servers/karypis.srv.2_TS4.pdb.gz...done running rosetta on decoys/servers/karypis.srv.2_TS5.pdb.gz...done running rosetta on decoys/servers/karypis.srv.4_TS1.pdb.gz...done running rosetta on decoys/servers/karypis.srv.4_TS2.pdb.gz...done running rosetta on decoys/servers/karypis.srv.4_TS3.pdb.gz...done running rosetta on decoys/servers/karypis.srv.4_TS4.pdb.gz...done running rosetta on decoys/servers/karypis.srv.4_TS5.pdb.gz...done running rosetta on decoys/servers/karypis.srv_TS1.pdb.gz...done running rosetta on decoys/servers/karypis.srv_TS2.pdb.gz...done running rosetta on decoys/servers/karypis.srv_TS3.pdb.gz...done running rosetta on decoys/servers/LOOPP_TS1.pdb.gz...done running rosetta on decoys/servers/LOOPP_TS2.pdb.gz...done running rosetta on decoys/servers/LOOPP_TS3.pdb.gz...done running rosetta on decoys/servers/LOOPP_TS4.pdb.gz...done running rosetta on decoys/servers/LOOPP_TS5.pdb.gz...done running rosetta on decoys/servers/Ma-OPUS-server_TS3.pdb.gz...done running rosetta on decoys/servers/Ma-OPUS-server_TS4.pdb.gz...done running rosetta on decoys/servers/Ma-OPUS-server_TS5.pdb.gz...done running rosetta on decoys/servers/MetaTasser_TS1.pdb.gz...done running rosetta on decoys/servers/MetaTasser_TS2.pdb.gz...done running rosetta on decoys/servers/MetaTasser_TS3.pdb.gz...done running rosetta on decoys/servers/MetaTasser_TS4.pdb.gz...done running rosetta on decoys/servers/mGen-3D_TS1.pdb.gz...done running rosetta on decoys/servers/MIG_FROST_AL1.pdb.gz...done running rosetta on decoys/servers/nFOLD_TS2.pdb.gz...done running rosetta on decoys/servers/nFOLD_TS3.pdb.gz...done running rosetta on decoys/servers/nFOLD_TS4.pdb.gz...done running rosetta on decoys/servers/nFOLD_TS5.pdb.gz...done running rosetta on decoys/servers/Pcons6_TS1.pdb.gz...done running rosetta on decoys/servers/Pcons6_TS2.pdb.gz...done running rosetta on decoys/servers/Pcons6_TS3.pdb.gz...done running rosetta on decoys/servers/Pcons6_TS4.pdb.gz...done running rosetta on decoys/servers/Pcons6_TS5.pdb.gz...done running rosetta on decoys/servers/Phyre-1_TS1.pdb.gz...done running rosetta on decoys/servers/Phyre-2_TS3.pdb.gz...done running rosetta on decoys/servers/Phyre-2_TS4.pdb.gz...done running rosetta on decoys/servers/Phyre-2_TS5.pdb.gz...done running rosetta on decoys/servers/Pmodeller6_TS1.pdb.gz...done running rosetta on decoys/servers/Pmodeller6_TS3.pdb.gz...done running rosetta on decoys/servers/Pmodeller6_TS5.pdb.gz...done running rosetta on decoys/servers/PROTINFO-AB_TS1.pdb.gz...done running rosetta on decoys/servers/PROTINFO-AB_TS2.pdb.gz...done running rosetta on decoys/servers/PROTINFO-AB_TS4.pdb.gz...done running rosetta on decoys/servers/PROTINFO-AB_TS5.pdb.gz...done running rosetta on decoys/servers/PROTINFO_TS1.pdb.gz...done running rosetta on decoys/servers/PROTINFO_TS2.pdb.gz...done running rosetta on decoys/servers/PROTINFO_TS3.pdb.gz...done running rosetta on decoys/servers/PROTINFO_TS5.pdb.gz...done running rosetta on decoys/servers/RAPTOR-ACE_TS2.pdb.gz...done running rosetta on decoys/servers/RAPTOR-ACE_TS3.pdb.gz...done running rosetta on decoys/servers/RAPTOR-ACE_TS4.pdb.gz...done running rosetta on decoys/servers/RAPTOR-ACE_TS5.pdb.gz...done running rosetta on decoys/servers/RAPTORESS_TS2.pdb.gz...done running rosetta on decoys/servers/RAPTORESS_TS3.pdb.gz...done running rosetta on decoys/servers/RAPTORESS_TS4.pdb.gz...done running rosetta on decoys/servers/RAPTORESS_TS5.pdb.gz...done running rosetta on decoys/servers/RAPTOR_TS1.pdb.gz...done running rosetta on decoys/servers/RAPTOR_TS2.pdb.gz...done running rosetta on decoys/servers/RAPTOR_TS5.pdb.gz...done running rosetta on decoys/servers/ROBETTA_TS1.pdb.gz...done running rosetta on decoys/servers/ROBETTA_TS2.pdb.gz...done running rosetta on decoys/servers/ROBETTA_TS3.pdb.gz...done running rosetta on decoys/servers/ROBETTA_TS4.pdb.gz...done running rosetta on decoys/servers/ROKKY_TS1.pdb.gz...done running rosetta on decoys/servers/ROKKY_TS2.pdb.gz...done running rosetta on decoys/servers/SP3_TS2.pdb.gz...done running rosetta on decoys/servers/ROKKY_TS4.pdb.gz...done running rosetta on decoys/servers/ROKKY_TS5.pdb.gz...done running rosetta on decoys/servers/SAM_T06_server_TS3.pdb.gz...done running rosetta on decoys/servers/SAM_T06_server_TS4.pdb.gz...done running rosetta on decoys/servers/SAM_T06_server_TS5.pdb.gz...done running rosetta on decoys/servers/SAM-T99_AL1.pdb.gz...done running rosetta on decoys/servers/SP3_TS1.pdb.gz...done running rosetta on decoys/servers/SP3_TS3.pdb.gz...done running rosetta on decoys/servers/SP3_TS4.pdb.gz...done running rosetta on decoys/servers/SP3_TS5.pdb.gz...done running rosetta on decoys/servers/SP4_TS2.pdb.gz...done running rosetta on decoys/servers/SP4_TS4.pdb.gz...done running rosetta on decoys/servers/SP4_TS5.pdb.gz...done running rosetta on decoys/servers/SPARKS2_TS1.pdb.gz...done running rosetta on decoys/servers/SPARKS2_TS4.pdb.gz...done running rosetta on decoys/servers/SPARKS2_TS5.pdb.gz...done running rosetta on decoys/servers/UNI-EID_bnmx_TS1.pdb.gz...done running rosetta on decoys/servers/UNI-EID_bnmx_TS3.pdb.gz...done running rosetta on decoys/servers/UNI-EID_bnmx_TS4.pdb.gz...done running rosetta on decoys/servers/UNI-EID_expm_TS1.pdb.gz...done running rosetta on decoys/servers/UNI-EID_sfst_AL1.pdb.gz...done running rosetta on decoys/servers/Zhang-Server_TS2.pdb.gz...done running rosetta on decoys/servers/Zhang-Server_TS4.pdb.gz...done running rosetta on decoys/servers/Zhang-Server_TS5.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_POPULUS_TS1.pdb.gz...done running rosetta on decoys/servers/forecast-s_AL3.pdb.gz...done running rosetta on decoys/servers/forecast-s_AL4.pdb.gz...done running rosetta on decoys/servers/forecast-s_AL5.pdb.gz...done running rosetta on decoys/servers/FORTE1_AL1.pdb.gz...done running rosetta on decoys/servers/FORTE1_AL2.pdb.gz...done running rosetta on decoys/servers/FORTE1_AL3.pdb.gz...done running rosetta on decoys/servers/FORTE1_AL4.pdb.gz...done running rosetta on decoys/servers/FORTE1_AL5.pdb.gz...done running rosetta on decoys/servers/FORTE2_AL2.pdb.gz...done running rosetta on decoys/servers/FORTE2_AL3.pdb.gz...done running rosetta on decoys/servers/FORTE2_AL4.pdb.gz...done running rosetta on decoys/servers/FORTE2_AL5.pdb.gz...done running rosetta on decoys/servers/FUGUE_AL1.pdb.gz...done running rosetta on decoys/servers/FUGUE_AL2.pdb.gz...done running rosetta on decoys/servers/FUGUE_AL3.pdb.gz...done running rosetta on decoys/servers/FUGUE_AL4.pdb.gz...done running rosetta on decoys/servers/FUGUE_AL5.pdb.gz...done running rosetta on decoys/servers/FUNCTION_TS1.pdb.gz...done running rosetta on decoys/servers/gtg_AL3.pdb.gz...done running rosetta on decoys/servers/gtg_AL4.pdb.gz...done running rosetta on decoys/servers/gtg_AL5.pdb.gz...done running rosetta on decoys/servers/HHpred1_TS1.pdb.gz...done running rosetta on decoys/servers/nFOLD_TS1.pdb.gz...done running rosetta on decoys/servers/SAM-T02_AL2.pdb.gz...done running rosetta on decoys/servers/SAM-T02_AL3.pdb.gz...done running rosetta on decoys/servers/SAM-T02_AL5.pdb.gz...done running rosetta on decoys/servers/SAM_T06_server_TS1.pdb.gz...done running rosetta on decoys/servers/SAM-T99_AL2.pdb.gz...done running rosetta on decoys/servers/SAM-T99_AL3.pdb.gz...done running rosetta on decoys/servers/SAM-T99_AL5.pdb.gz...done running rosetta on decoys/servers/shub_TS1.pdb.gz...done running rosetta on decoys/servers/UNI-EID_sfst_AL2.pdb.gz...done running rosetta on decoys/servers/UNI-EID_sfst_AL3.pdb.gz...done running rosetta on decoys/servers/UNI-EID_sfst_AL4.pdb.gz...done running rosetta on decoys/servers/UNI-EID_sfst_AL5.pdb.gz...done running rosetta on decoys/servers/Zhang-Server_TS1.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_POPULUS_TS2.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_POPULUS_TS3.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_TS4.pdb.gz...done running rosetta on decoys/servers/beautshot_TS1.pdb.gz...done running rosetta on decoys/servers/CaspIta-FOX_TS2.pdb.gz...done running rosetta on decoys/servers/CIRCLE_TS5.pdb.gz...done running rosetta on decoys/servers/Distill_TS5.pdb.gz...done running rosetta on decoys/servers/FAMS_TS1.pdb.gz...done running rosetta on decoys/servers/FOLDpro_TS2.pdb.gz...done running rosetta on decoys/servers/FPSOLVER-SERVER_TS2.pdb.gz...done running rosetta on decoys/servers/GeneSilicoMetaServer_TS2.pdb.gz...done running rosetta on decoys/servers/HHpred3_TS1.pdb.gz...done running rosetta on decoys/servers/karypis.srv_TS4.pdb.gz...done running rosetta on decoys/servers/Ma-OPUS-server_TS1.pdb.gz...done running rosetta on decoys/servers/Ma-OPUS-server_TS2.pdb.gz...done running rosetta on decoys/servers/MetaTasser_TS5.pdb.gz...done running rosetta on decoys/servers/panther2_TS1.pdb.gz...done running rosetta on decoys/servers/Phyre-2_TS1.pdb.gz...done running rosetta on decoys/servers/Pmodeller6_TS2.pdb.gz...done running rosetta on decoys/servers/PROTINFO-AB_TS3.pdb.gz...done running rosetta on decoys/servers/RAPTOR-ACE_TS1.pdb.gz...done running rosetta on decoys/servers/RAPTORESS_TS1.pdb.gz...done running rosetta on decoys/servers/ROBETTA_TS5.pdb.gz...done running rosetta on decoys/servers/ROKKY_TS3.pdb.gz...done running rosetta on decoys/servers/SAM_T06_server_TS2.pdb.gz...done running rosetta on decoys/servers/SP4_TS3.pdb.gz...done running rosetta on decoys/servers/SPARKS2_TS2.pdb.gz...done running rosetta on decoys/servers/UNI-EID_bnmx_TS2.pdb.gz...done running rosetta on decoys/servers/Zhang-Server_TS3.pdb.gz...done running rosetta on decoys/servers/3D-JIGSAW_RECOM_TS2.pdb.gz...done running rosetta on decoys/servers/ABIpro_TS2.pdb.gz...done running rosetta on decoys/servers/Bilab-ENABLE_TS1.pdb.gz...done running rosetta on decoys/servers/CaspIta-FOX_TS5.pdb.gz...done running rosetta on decoys/servers/FAMS_TS2.pdb.gz...done running rosetta on decoys/servers/FOLDpro_TS3.pdb.gz...done running rosetta on decoys/servers/forecast-s_AL2.pdb.gz...done running rosetta on decoys/servers/FORTE2_AL1.pdb.gz...done running rosetta on decoys/servers/FPSOLVER-SERVER_TS1.pdb.gz...done running rosetta on decoys/servers/FPSOLVER-SERVER_TS5.pdb.gz...done running rosetta on decoys/servers/GeneSilicoMetaServer_TS1.pdb.gz...done running rosetta on decoys/servers/Huber-Torda-Server_TS2.pdb.gz...done running rosetta on decoys/servers/Huber-Torda-Server_TS5.pdb.gz...done running rosetta on decoys/servers/NN_PUT_lab_TS1.pdb.gz...done running rosetta on decoys/servers/Phyre-2_TS2.pdb.gz...done running rosetta on decoys/servers/Pmodeller6_TS4.pdb.gz...done running rosetta on decoys/servers/PROTINFO_TS4.pdb.gz...done running rosetta on decoys/servers/RAPTOR_TS3.pdb.gz...done running rosetta on decoys/servers/RAPTOR_TS4.pdb.gz...done running rosetta on decoys/servers/SAM-T02_AL1.pdb.gz...done running rosetta on decoys/servers/SAM-T02_AL4.pdb.gz...done running rosetta on decoys/servers/SAM-T99_AL4.pdb.gz...done running rosetta on decoys/servers/SP4_TS1.pdb.gz...done running rosetta on decoys/servers/SPARKS2_TS3.pdb.gz...done running rosetta on decoys/servers/UNI-EID_bnmx_TS5.pdb.gz...done printing rdb file...done removing /tmp/rosetta_score-30884-862978382...done /projects/compbio/bin/sorttbl name < decoys/servers.rosetta.rdb > sort.tmp mv -v sort.tmp decoys/servers.rosetta.rdb `sort.tmp' -> `decoys/servers.rosetta.rdb'