Best Alignments for T0303

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0303-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0303-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6628e-243.39e-104
1te2A/T0303-1te2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0303-1te2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9759e-223.26e-106 c.108.1.6
2fdrA/T0303-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0303-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3560e-226.18e-98
2gfhA/T0303-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0303-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0099e-217.09e-101
1zrn/T0303-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zrn/T0303-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3054e-214.39e-98 1qq5A c.108.1.1
1x42A/T0303-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0303-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0063e-201.94e-94
1swvA/T0303-1swvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0303-1swvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9865e-201.92e-91
1rdfA/T0303-1rdfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rdfA/T0303-1rdfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4174e-198.26e-86 c.108.1.3
2go7A/T0303-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0303-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8755e-197.64e-99
2fi1A/T0303-2fi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fi1A/T0303-2fi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8737e-184.55e-87

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001