# converted from rr file by 'rr2constraints.py' # Fri Dec 7 23:38:43 2007 # parameters: # nonbonus: 0.010000*sequencelen # topfraction: 0.750000*sequencelen # Constraint A360.CB V371.CB -100. 7.0 9.0 0.214701 Constraint M213.CB F222.CB -100. 7.0 9.0 0.207522 Constraint A211.CB V221.CB -100. 7.0 9.0 0.205361 Constraint T212.CB F222.CB -100. 7.0 9.0 0.199360 bonus Constraint I136.CB A147.CB -100. 7.0 9.0 0.192471 bonus Constraint A279.CB V304.CB -100. 7.0 9.0 0.185830 bonus Constraint I73.CB L87.CB -100. 7.0 9.0 0.180847 bonus Constraint I136.CB I145.CB -100. 7.0 9.0 0.180930 bonus Constraint A211.CB F222.CB -100. 7.0 9.0 0.178697 bonus Constraint I214.CB V223.CB -100. 7.0 9.0 0.169070 bonus Constraint V134.CB I145.CB -100. 7.0 9.0 0.167708 bonus Constraint V72.CB L87.CB -100. 7.0 9.0 0.166173 bonus Constraint I73.CB Y88.CB -100. 7.0 9.0 0.165845 bonus Constraint C132.CB V149.CB -100. 7.0 9.0 0.157723 bonus Constraint L201.CB A211.CB -100. 7.0 9.0 0.156773 bonus Constraint L74.CB Y88.CB -100. 7.0 9.0 0.154594 bonus Constraint A211.CB T220.CB -100. 7.0 9.0 0.153420 bonus Constraint M213.CB V223.CB -100. 7.0 9.0 0.153045 bonus Constraint I278.CB A306.CB -100. 7.0 9.0 0.152407 bonus Constraint C71.CB Y88.CB -100. 7.0 9.0 0.147910 bonus Constraint Y88.CB V98.CB -100. 7.0 9.0 0.144562 bonus Constraint V72.CB V91.CB -100. 7.0 9.0 0.142968 bonus Constraint L74.CB L87.CB -100. 7.0 9.0 0.143312 bonus Constraint V347.CB V358.CB -100. 7.0 9.0 0.142951 bonus Constraint A279.CB A306.CB -100. 7.0 9.0 0.141164 bonus Constraint V281.CB L303.CB -100. 7.0 9.0 0.137136 bonus Constraint C71.CB L87.CB -100. 7.0 9.0 0.132114 bonus Constraint I73.CB Y86.CB -100. 7.0 9.0 0.130285 bonus Constraint R135.CB V149.CB -100. 7.0 9.0 0.128067 bonus Constraint L74.CB V84.CB -100. 7.0 9.0 0.127000 bonus Constraint E133.CB H148.CB -100. 7.0 9.0 0.126811 bonus Constraint A211.CB V223.CB -100. 7.0 9.0 0.127348 bonus Constraint C71.CB V91.CB -100. 7.0 9.0 0.124807 bonus Constraint I73.CB V91.CB -100. 7.0 9.0 0.125500 bonus Constraint V347.CB A360.CB -100. 7.0 9.0 0.126463 bonus Constraint G89.CA V98.CB -100. 7.0 9.0 0.122702 bonus Constraint A279.CB L302.CB -100. 7.0 9.0 0.122075 bonus Constraint I73.CB G89.CA -100. 7.0 9.0 0.119754 bonus Constraint L74.CB Y86.CB -100. 7.0 9.0 0.120590 bonus Constraint E133.CB A147.CB -100. 7.0 9.0 0.120214 bonus Constraint V134.CB V149.CB -100. 7.0 9.0 0.119784 bonus Constraint L14.CB F23.CB -100. 7.0 9.0 0.117414 bonus Constraint C71.CB G89.CA -100. 7.0 9.0 0.116005 bonus Constraint F280.CB A306.CB -100. 7.0 9.0 0.117005 bonus Constraint L14.CB F24.CB -100. 7.0 9.0 0.112903 bonus Constraint R15.CB F24.CB -100. 7.0 9.0 0.112948 bonus Constraint I73.CB V84.CB -100. 7.0 9.0 0.113545 bonus Constraint L87.CB V98.CB -100. 7.0 9.0 0.113540 bonus Constraint Y88.CB R135.CB -100. 7.0 9.0 0.112656 bonus Constraint F209.CB F222.CB -100. 7.0 9.0 0.113007 bonus Constraint C132.CB I145.CB -100. 7.0 9.0 0.110957 bonus Constraint V358.CB V371.CB -100. 7.0 9.0 0.111766 bonus Constraint V72.CB V84.CB -100. 7.0 9.0 0.109450 bonus Constraint C132.CB H148.CB -100. 7.0 9.0 0.110061 bonus Constraint D200.CB A211.CB -100. 7.0 9.0 0.108953 bonus Constraint E133.CB V149.CB -100. 7.0 9.0 0.107741 bonus Constraint F162.CB V175.CB -100. 7.0 9.0 0.105061 bonus Constraint D200.CB K210.CB -100. 7.0 9.0 0.105030 bonus Constraint F280.CB L302.CB -100. 7.0 9.0 0.105149 bonus Constraint C132.CB V151.CB -100. 7.0 9.0 0.102555 bonus Constraint G60.CA K70.CB -100. 7.0 9.0 0.100555 bonus Constraint V72.CB V134.CB -100. 7.0 9.0 0.100690 bonus Constraint Y88.CB I136.CB -100. 7.0 9.0 0.101178 bonus Constraint F222.CB I278.CB -100. 7.0 9.0 0.102094 bonus Constraint K277.CB A306.CB -100. 7.0 9.0 0.100378 bonus Constraint F280.CB L307.CB -100. 7.0 9.0 0.100821 bonus Constraint Y88.CB V134.CB -100. 7.0 9.0 0.099361 bonus Constraint A346.CB A362.CB -100. 7.0 9.0 0.099920 bonus Constraint S69.CB V91.CB -100. 7.0 9.0 0.097986 bonus Constraint F162.CB I174.CB -100. 7.0 9.0 0.098719 bonus Constraint V281.CB V304.CB -100. 7.0 9.0 0.098406 bonus Constraint I136.CB V149.CB -100. 7.0 9.0 0.097158 bonus Constraint G62.CA I73.CB -100. 7.0 9.0 0.095899 bonus Constraint K70.CB V91.CB -100. 7.0 9.0 0.095797 bonus Constraint M61.CB K70.CB -100. 7.0 9.0 0.094464 bonus Constraint K70.CB Y88.CB -100. 7.0 9.0 0.094593 bonus Constraint V281.CB L302.CB -100. 7.0 9.0 0.094806 bonus Constraint E361.CB T372.CB -100. 7.0 9.0 0.095366 bonus Constraint L74.CB G89.CA -100. 7.0 9.0 0.093984 bonus Constraint I278.CB L302.CB -100. 7.0 9.0 0.093566 bonus Constraint A282.CB V304.CB -100. 7.0 9.0 0.093257 bonus Constraint A362.CB V371.CB -100. 7.0 9.0 0.094191 bonus Constraint K70.CB Q90.CB -100. 7.0 9.0 0.091799 bonus Constraint L74.CB V91.CB -100. 7.0 9.0 0.091804 bonus Constraint I145.CB V175.CB -100. 7.0 9.0 0.092242 bonus Constraint V198.CB A211.CB -100. 7.0 9.0 0.092467 bonus Constraint L201.CB M213.CB -100. 7.0 9.0 0.091910 bonus Constraint L201.CB F222.CB -100. 7.0 9.0 0.092361 bonus Constraint L87.CB I136.CB -100. 7.0 9.0 0.091294 bonus Constraint Y13.CB F24.CB -100. 7.0 9.0 0.089593 bonus Constraint E133.CB I146.CB -100. 7.0 9.0 0.090457 bonus Constraint K210.CB N224.CB -100. 7.0 9.0 0.087808 bonus Constraint L307.CB A320.CB -100. 7.0 9.0 0.087879 bonus Constraint A147.CB V175.CB -100. 7.0 9.0 0.086656 bonus Constraint A225.CB E234.CB -100. 7.0 9.0 0.085499 bonus Constraint I278.CB L307.CB -100. 7.0 9.0 0.086495 bonus Constraint L356.CB V371.CB -100. 7.0 9.0 0.086887 bonus Constraint Y86.CB V98.CB -100. 7.0 9.0 0.085856 bonus Constraint A147.CB L176.CB -100. 7.0 9.0 0.085544 bonus Constraint E361.CB T370.CB -100. 7.0 9.0 0.085681 bonus Constraint G62.CA C71.CB -100. 7.0 9.0 0.083475 bonus Constraint C71.CB V84.CB -100. 7.0 9.0 0.084175 bonus Constraint A306.CB M317.CB -100. 7.0 9.0 0.084488 bonus Constraint V221.CB A279.CB -100. 7.0 9.0 0.082198 bonus Constraint F222.CB F280.CB -100. 7.0 9.0 0.082806 bonus Constraint K277.CB V304.CB -100. 7.0 9.0 0.083374 bonus Constraint V347.CB A362.CB -100. 7.0 9.0 0.084024 bonus Constraint Y13.CB F23.CB -100. 7.0 9.0 0.082689 bonus Constraint A282.CB R305.CB -100. 7.0 9.0 0.082968 bonus Constraint R357.CB T372.CB -100. 7.0 9.0 0.083376 bonus Constraint G63.CA V72.CB -100. 7.0 9.0 0.082235 bonus Constraint V121.CB V134.CB -100. 7.0 9.0 0.081346 bonus Constraint E133.CB V175.CB -100. 7.0 9.0 0.081904 bonus Constraint D200.CB M213.CB -100. 7.0 9.0 0.082163 bonus Constraint T144.CB V175.CB -100. 7.0 9.0 0.080192 bonus Constraint L176.CB A211.CB -100. 7.0 9.0 0.081055 bonus Constraint F349.CB V358.CB -100. 7.0 9.0 0.082027 bonus Constraint I58.CB V72.CB -100. 7.0 9.0 0.077949 bonus Constraint S69.CB Y88.CB -100. 7.0 9.0 0.078805 bonus Constraint Y88.CB A111.CB -100. 7.0 9.0 0.079558 bonus Constraint T144.CB Q157.CB -100. 7.0 9.0 0.078673 bonus Constraint L201.CB V221.CB -100. 7.0 9.0 0.079554 bonus Constraint L176.CB F222.CB -100. 7.0 9.0 0.078338 bonus Constraint D199.CB T212.CB -100. 7.0 9.0 0.078088 bonus Constraint A346.CB R357.CB -100. 7.0 9.0 0.077851 bonus Constraint Y13.CB V22.CB -100. 7.0 9.0 0.076310 bonus Constraint M61.CB V72.CB -100. 7.0 9.0 0.076446 bonus Constraint S69.CB Q90.CB -100. 7.0 9.0 0.076458 bonus Constraint V134.CB F178.CB -100. 7.0 9.0 0.077294 bonus Constraint G60.CA S69.CB -100. 7.0 9.0 0.075300 bonus Constraint C71.CB V98.CB -100. 7.0 9.0 0.076259 bonus Constraint C132.CB P150.CB -100. 7.0 9.0 0.075980 bonus Constraint I145.CB Q157.CB -100. 7.0 9.0 0.076388 bonus Constraint I145.CB L176.CB -100. 7.0 9.0 0.075777 bonus Constraint F178.CB V221.CB -100. 7.0 9.0 0.076251 bonus Constraint V304.CB V347.CB -100. 7.0 9.0 0.076434 bonus Constraint A320.CB L334.CB -100. 7.0 9.0 0.076037 bonus Constraint S345.CB A362.CB -100. 7.0 9.0 0.076651 bonus Constraint V347.CB L356.CB -100. 7.0 9.0 0.076703 bonus Constraint G359.CA T372.CB -100. 7.0 9.0 0.076734 bonus Constraint Y88.CB T109.CB -100. 7.0 9.0 0.074927 bonus Constraint V175.CB V198.CB -100. 7.0 9.0 0.074838 bonus Constraint L176.CB V221.CB -100. 7.0 9.0 0.074897 bonus Constraint F178.CB G189.CA -100. 7.0 9.0 0.075621 bonus Constraint F209.CB V221.CB -100. 7.0 9.0 0.074866 bonus Constraint I278.CB S308.CB -100. 7.0 9.0 0.075674 bonus Constraint V304.CB I324.CB -100. 7.0 9.0 0.074494 bonus Constraint S345.CB G359.CA -100. 7.0 9.0 0.074819 bonus Constraint A346.CB E361.CB -100. 7.0 9.0 0.075200 bonus Constraint L87.CB V134.CB -100. 7.0 9.0 0.073089 bonus Constraint C132.CB I146.CB -100. 7.0 9.0 0.073651 bonus Constraint I146.CB E158.CB -100. 7.0 9.0 0.072639 bonus Constraint Q157.CB V175.CB -100. 7.0 9.0 0.073432 bonus Constraint A282.CB L303.CB -100. 7.0 9.0 0.074150 bonus Constraint A346.CB S363.CB -100. 7.0 9.0 0.073274 bonus Constraint V347.CB V371.CB -100. 7.0 9.0 0.073949 bonus Constraint K70.CB L87.CB -100. 7.0 9.0 0.072279 bonus Constraint L14.CB V72.CB -100. 7.0 9.0 0.071073 bonus Constraint G62.CA L74.CB -100. 7.0 9.0 0.070822 bonus Constraint K70.CB Y86.CB -100. 7.0 9.0 0.071231 bonus Constraint V72.CB I136.CB -100. 7.0 9.0 0.072010 bonus Constraint L120.CB V134.CB -100. 7.0 9.0 0.071970 bonus Constraint E133.CB P150.CB -100. 7.0 9.0 0.071830 bonus Constraint I136.CB L176.CB -100. 7.0 9.0 0.071458 bonus Constraint D161.CB V175.CB -100. 7.0 9.0 0.071916 bonus Constraint F178.CB I191.CB -100. 7.0 9.0 0.071313 bonus Constraint F178.CB F192.CB -100. 7.0 9.0 0.071517 bonus Constraint F178.CB A211.CB -100. 7.0 9.0 0.071948 bonus Constraint V223.CB A279.CB -100. 7.0 9.0 0.072669 bonus Constraint I146.CB V175.CB -100. 7.0 9.0 0.069410 bonus Constraint V149.CB E158.CB -100. 7.0 9.0 0.070234 bonus Constraint F162.CB L179.CB -100. 7.0 9.0 0.070101 bonus Constraint V167.CB F178.CB -100. 7.0 9.0 0.069930 bonus Constraint F178.CB T212.CB -100. 7.0 9.0 0.069512 bonus Constraint L179.CB V198.CB -100. 7.0 9.0 0.070285 bonus Constraint H274.CB A306.CB -100. 7.0 9.0 0.071249 bonus Constraint V134.CB L176.CB -100. 7.0 9.0 0.070224 bonus Constraint I278.CB D301.CB -100. 7.0 9.0 0.070836 bonus Constraint A346.CB Q364.CB -100. 7.0 9.0 0.070123 bonus Constraint A362.CB T372.CB -100. 7.0 9.0 0.070898 bonus Constraint V121.CB R135.CB -100. 7.0 9.0 0.068125 bonus Constraint I131.CB P150.CB -100. 7.0 9.0 0.068710 bonus Constraint I136.CB V175.CB -100. 7.0 9.0 0.069460 bonus Constraint I145.CB F178.CB -100. 7.0 9.0 0.068339 bonus Constraint L176.CB T220.CB -100. 7.0 9.0 0.068193 bonus Constraint L179.CB D200.CB -100. 7.0 9.0 0.068907 bonus Constraint V221.CB F280.CB -100. 7.0 9.0 0.069079 bonus Constraint M61.CB C71.CB -100. 7.0 9.0 0.068028 bonus Constraint D83.CB I93.CB -100. 7.0 9.0 0.067925 bonus Constraint F44.CB V72.CB -100. 7.0 9.0 0.065951 bonus Constraint S69.CB Y86.CB -100. 7.0 9.0 0.066894 bonus Constraint L74.CB D83.CB -100. 7.0 9.0 0.066025 bonus Constraint V84.CB I93.CB -100. 7.0 9.0 0.066900 bonus Constraint Y86.CB V134.CB -100. 7.0 9.0 0.065997 bonus Constraint Y88.CB N106.CB -100. 7.0 9.0 0.066554 bonus Constraint L164.CB I174.CB -100. 7.0 9.0 0.066952 bonus Constraint I191.CB L201.CB -100. 7.0 9.0 0.067506 bonus Constraint M213.CB V304.CB -100. 7.0 9.0 0.067120 bonus Constraint E177.CB T220.CB -100. 7.0 9.0 0.065925 bonus Constraint A279.CB D301.CB -100. 7.0 9.0 0.066750 bonus Constraint T12.CB R25.CB -100. 7.0 9.0 0.064722 bonus Constraint G60.CA I73.CB -100. 7.0 9.0 0.064728 bonus Constraint K70.CB V84.CB -100. 7.0 9.0 0.064907 bonus Constraint N106.CB A115.CB -100. 7.0 9.0 0.065056 bonus Constraint I131.CB H148.CB -100. 7.0 9.0 0.065554 bonus Constraint C132.CB E158.CB -100. 7.0 9.0 0.065651 bonus Constraint V134.CB P150.CB -100. 7.0 9.0 0.065657 bonus Constraint E177.CB F222.CB -100. 7.0 9.0 0.064953 bonus Constraint K277.CB R305.CB -100. 7.0 9.0 0.065628 bonus Constraint I146.CB Q157.CB -100. 7.0 9.0 0.063254 bonus Constraint P181.CB I278.CB -100. 7.0 9.0 0.064180 bonus Constraint V175.CB D200.CB -100. 7.0 9.0 0.063173 bonus Constraint F178.CB P193.CB -100. 7.0 9.0 0.063817 bonus Constraint V221.CB I278.CB -100. 7.0 9.0 0.063418 bonus Constraint V223.CB I278.CB -100. 7.0 9.0 0.063851 bonus Constraint V223.CB F280.CB -100. 7.0 9.0 0.063823 bonus Constraint L303.CB A362.CB -100. 7.0 9.0 0.064532 bonus Constraint D59.CB K70.CB -100. 7.0 9.0 0.060953 bonus Constraint G60.CA C71.CB -100. 7.0 9.0 0.061678 bonus Constraint S69.CB V84.CB -100. 7.0 9.0 0.062389 bonus Constraint K70.CB D83.CB -100. 7.0 9.0 0.061934 bonus Constraint H82.CB V91.CB -100. 7.0 9.0 0.062325 bonus Constraint Y86.CB I136.CB -100. 7.0 9.0 0.061255 bonus Constraint Y88.CB D99.CB -100. 7.0 9.0 0.061461 bonus Constraint V91.CB N106.CB -100. 7.0 9.0 0.061976 bonus Constraint V91.CB V134.CB -100. 7.0 9.0 0.061932 bonus Constraint E133.CB E158.CB -100. 7.0 9.0 0.061271 bonus Constraint V134.CB T144.CB -100. 7.0 9.0 0.061340 bonus Constraint R135.CB P150.CB -100. 7.0 9.0 0.061992 bonus Constraint F222.CB V281.CB -100. 7.0 9.0 0.061931 bonus Constraint L262.CB K277.CB -100. 7.0 9.0 0.062407 bonus Constraint L303.CB R348.CB -100. 7.0 9.0 0.062565 bonus Constraint L303.CB G359.CA -100. 7.0 9.0 0.063078 bonus Constraint L356.CB R389.CB -100. 7.0 9.0 0.063836 bonus Constraint V167.CB L176.CB -100. 7.0 9.0 0.062701 bonus Constraint L176.CB M213.CB -100. 7.0 9.0 0.062689 bonus Constraint D200.CB T220.CB -100. 7.0 9.0 0.062585 bonus Constraint K277.CB L307.CB -100. 7.0 9.0 0.061654 bonus Constraint V304.CB M316.CB -100. 7.0 9.0 0.062363 bonus Constraint H148.CB Q157.CB -100. 7.0 9.0 0.060361 bonus Constraint F178.CB M213.CB -100. 7.0 9.0 0.060440 bonus Constraint V198.CB N224.CB -100. 7.0 9.0 0.060367 bonus Constraint D200.CB V221.CB -100. 7.0 9.0 0.060774 bonus Constraint T355.CB Q364.CB -100. 7.0 9.0 0.061311 bonus Constraint T12.CB F23.CB -100. 7.0 9.0 0.060049 bonus Constraint I73.CB D83.CB -100. 7.0 9.0 0.059221 bonus Constraint V84.CB V98.CB -100. 7.0 9.0 0.060119 bonus Constraint G89.CA I136.CB -100. 7.0 9.0 0.060622 bonus Constraint Y88.CB L107.CB -100. 7.0 9.0 0.058511 bonus Constraint V91.CB L107.CB -100. 7.0 9.0 0.059227 bonus Constraint G112.CA V134.CB -100. 7.0 9.0 0.059886 bonus Constraint R348.CB A362.CB -100. 7.0 9.0 0.060204 bonus Constraint R15.CB K70.CB -100. 7.0 9.0 0.058100 bonus Constraint H57.CB L74.CB -100. 7.0 9.0 0.059024 bonus Constraint F23.CB V72.CB -100. 7.0 9.0 0.057868 bonus Constraint H57.CB I73.CB -100. 7.0 9.0 0.058015 bonus Constraint G60.CA L74.CB -100. 7.0 9.0 0.058018 bonus Constraint S69.CB D83.CB -100. 7.0 9.0 0.058309 bonus Constraint S69.CB I93.CB -100. 7.0 9.0 0.058500 bonus Constraint C71.CB I136.CB -100. 7.0 9.0 0.058603 bonus Constraint H82.CB I93.CB -100. 7.0 9.0 0.057619 bonus Constraint L87.CB S108.CB -100. 7.0 9.0 0.057633 bonus Constraint G105.CA A115.CB -100. 7.0 9.0 0.057617 bonus Constraint G110.CA I136.CB -100. 7.0 9.0 0.058493 bonus Constraint A190.CB D200.CB -100. 7.0 9.0 0.059005 bonus Constraint V175.CB T220.CB -100. 7.0 9.0 0.057563 bonus Constraint F178.CB G188.CA -100. 7.0 9.0 0.057947 bonus Constraint L201.CB T220.CB -100. 7.0 9.0 0.057564 bonus Constraint F209.CB T220.CB -100. 7.0 9.0 0.058451 bonus Constraint V223.CB V281.CB -100. 7.0 9.0 0.058031 bonus Constraint A306.CB I324.CB -100. 7.0 9.0 0.058021 bonus Constraint G17.CA L29.CB -100. 7.0 9.0 0.056034 bonus Constraint S19.CB L29.CB -100. 7.0 9.0 0.056732 bonus Constraint I58.CB K70.CB -100. 7.0 9.0 0.055206 bonus Constraint M61.CB I73.CB -100. 7.0 9.0 0.055704 bonus Constraint D85.CB F97.CB -100. 7.0 9.0 0.056059 bonus Constraint C132.CB Q157.CB -100. 7.0 9.0 0.056477 bonus Constraint E133.CB V151.CB -100. 7.0 9.0 0.055812 bonus Constraint I136.CB I174.CB -100. 7.0 9.0 0.056334 bonus Constraint I136.CB F178.CB -100. 7.0 9.0 0.056589 bonus Constraint I145.CB I174.CB -100. 7.0 9.0 0.056270 bonus Constraint F209.CB V223.CB -100. 7.0 9.0 0.056724 bonus Constraint R348.CB E361.CB -100. 7.0 9.0 0.057460 bonus Constraint G359.CA K373.CB -100. 7.0 9.0 0.057135 bonus Constraint H148.CB V175.CB -100. 7.0 9.0 0.055514 bonus Constraint E163.CB V175.CB -100. 7.0 9.0 0.054618 bonus Constraint F178.CB F222.CB -100. 7.0 9.0 0.055229 bonus Constraint G189.CA D199.CB -100. 7.0 9.0 0.055520 bonus Constraint A211.CB F280.CB -100. 7.0 9.0 0.054905 bonus Constraint M213.CB F280.CB -100. 7.0 9.0 0.055569 bonus Constraint N215.CB A225.CB -100. 7.0 9.0 0.054960 bonus Constraint V281.CB L307.CB -100. 7.0 9.0 0.055862 bonus Constraint V304.CB R348.CB -100. 7.0 9.0 0.055191 bonus Constraint I324.CB V335.CB -100. 7.0 9.0 0.055947 bonus Constraint A346.CB T372.CB -100. 7.0 9.0 0.055957 bonus Constraint V304.CB V358.CB -100. 7.0 9.0 0.054227 bonus