Best Alignments for T0300

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1debA/T0300-1debA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1debA/T0300-1debA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9522e-014.61e-03 1debA h.1.18.1
1pb6A/T0300-1pb6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pb6A/T0300-1pb6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5018e+004.19e-01 a.4.1.9
a.121.1.1
1kxu/T0300-1kxu-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kxu/T0300-1kxu-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2014e+013.38e-08 1jkw a.74.1.1
a.74.1.1
1fmhA/T0300-1fmhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fmhA/T0300-1fmhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4553e+011.56e+02 1fmhB k.6.1.1
1l8dA/T0300-1l8dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l8dA/T0300-1l8dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8379e+011.63e-03 h.4.12.1
1p9iA/T0300-1p9iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p9iA/T0300-1p9iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1375e+012.51e+02 h.1.10.1
1nh1A/T0300-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nh1A/T0300-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1715e+013.14e-04 e.45.1.1
1j8bA/T0300-1j8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j8bA/T0300-1j8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2063e+011.77e-02 d.222.1.1
1ad1A/T0300-1ad1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ad1A/T0300-1ad1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3400e+013.66e-07 1aj2 c.1.21.1
2aucA/T0300-2aucA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aucA/T0300-2aucA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5815e+014.38e-03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001