Best Alignments for T0300

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1debA/T0300-1debA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1debA/T0300-1debA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8954e-014.61e-03 1debA h.1.18.1
1pb6A/T0300-1pb6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pb6A/T0300-1pb6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7283e+004.19e-01 a.4.1.9
a.121.1.1
1fmhA/T0300-1fmhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fmhA/T0300-1fmhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7576e+001.74e+02 1fmhB k.6.1.1
1l8dA/T0300-1l8dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l8dA/T0300-1l8dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0336e+001.63e-03 h.4.12.1
1p9iA/T0300-1p9iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p9iA/T0300-1p9iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0619e+002.84e+02 h.1.10.1
1f45B/T0300-1f45B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f45B/T0300-1f45B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6261e+006.05e+02 1f45B a.26.1.1
1j8bA/T0300-1j8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j8bA/T0300-1j8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4794e+001.77e-02 d.222.1.1
1nh1A/T0300-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nh1A/T0300-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0015e+013.14e-04 e.45.1.1
1y8aA/T0300-1y8aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y8aA/T0300-1y8aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1823e+012.73e-05
1ad1A/T0300-1ad1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ad1A/T0300-1ad1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3249e+013.66e-07 1aj2 c.1.21.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001