Best Alignments for T0300

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1debA/T0300-1debA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1debA/T0300-1debA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7926e-017.01e-03 1debA h.1.18.1
1lg2A/T0300-1lg2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lg2A/T0300-1lg2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8300e-011.08e+04 c.1.8.5
d.26.3.1
1culA/T0300-1culA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1culA/T0300-1culA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5300e+003.84e-01 1azsA d.58.29.1
1kxu/T0300-1kxu-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kxu/T0300-1kxu-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0031e+005.23e-08 1jkw a.74.1.1
a.74.1.1
1u2uA/T0300-1u2uA-t04-global-adpstyle1.a2m 1u2uA/T0300-1u2uA-t04-global-adpstyle1.al 6.8706e+003.52e-01
1pb6A/T0300-1pb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pb6A/T0300-1pb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8945e+001.18e+00 a.4.1.9
a.121.1.1
2aucA/T0300-2aucA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aucA/T0300-2aucA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0467e+011.20e-02
1og6A/T0300-1og6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1og6A/T0300-1og6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1100e+012.21e-03 c.1.7.1
2adoA/T0300-2adoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2adoA/T0300-2adoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1281e+012.53e-05
1yg2A/T0300-1yg2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yg2A/T0300-1yg2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4860e+011.82e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001