CreatePredAlphaCost pred_alpha2k alpha11 T0299.t2k.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha04 alpha11 T0299.t04.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha06 alpha11 T0299.t06.alpha.rdb 2 alpha alpha_prev sum SetCost wet6.5 15 near_backbone 5 way_back 5 dry5 15 dry6.5 20 dry8 15 dry12 5 \ phobic_fit 2 \ sidechain 3 \ n_ca_c 5 bad_peptide 10 \ bystroff 5 \ soft_clashes 20 backbone_clashes 2 \ break 60 \ pred_alpha2k 2 \ pred_alpha04 2 \ pred_alpha06 2 \ constraints 15 \ hbond_geom 5 \ hbond_geom_backbone 10 \ hbond_geom_beta 50 \ hbond_geom_beta_pair 100 \ missing_atoms 1 # from T0299.t06.str2.constraints StrandConstraint R3 I11 0.622 HelixConstraint M21 N30 0.903 StrandConstraint S38 Y39 0.655 StrandConstraint I45 F47 0.671 HelixConstraint K53 H67 0.774 StrandConstraint F74 L77 0.703 HelixConstraint L79 E87 0.891 StrandConstraint D101 Y105 0.697 HelixConstraint V111 E119 0.628 StrandConstraint V127 G131 0.655 StrandConstraint G134 G138 0.65 HelixConstraint A149 L154 0.705 HelixConstraint A168 L178 0.646 # try12 sheets # SheetConstraint (T0299)Y4 (T0299)L7 (T0299)E37 (T0299)I40 hbond (T0299)A5 .5 # SheetConstraint (T0299)Y4 (T0299)V8 (T0299)Q72 (T0299)L76 hbond (T0299)L6 .5 # SheetConstraint (T0299)A98 (T0299)F104 (T0299)L128 (T0299)G134 hbond (T0299)K100 .5 # SheetConstraint (T0299)F130 (T0299)F136 (T0299)H151 (T0299)V157 hbond (T0299)K132 .5 include rr.0.1.constraints