Best Alignments for T0299

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vjrA/T0299-1vjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjrA/T0299-1vjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7041e-017.91e-18 c.108.1.14
1fp1D/T0299-1fp1D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fp1D/T0299-1fp1D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4541e-011.40e-14 1fpqA a.4.5.29
c.66.1.12
1atg/T0299-1atg-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1atg/T0299-1atg-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2363e+001.58e-07 1atg c.94.1.1
1xzoA/T0299-1xzoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xzoA/T0299-1xzoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3496e+002.07e-11
1ccwA/T0299-1ccwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ccwA/T0299-1ccwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9737e+004.56e-14 1be1 c.23.6.1
1i6wA/T0299-1i6wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i6wA/T0299-1i6wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3854e+002.11e-08 1i6wA c.69.1.18
1k68A/T0299-1k68A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k68A/T0299-1k68A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1613e+007.46e-09 c.23.1.1
1zghA/T0299-1zghA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zghA/T0299-1zghA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7166e+002.11e-03
1t6nA/T0299-1t6nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t6nA/T0299-1t6nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2221e+001.62e-09 c.37.1.19
1ctf/T0299-1ctf-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ctf/T0299-1ctf-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2324e+003.62e-08 1ctf d.45.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001