/projects/compbio/experiments/protein-predict/casp7/starter-directory/Make.main:725: SECONDARY_TARGET = T0298.t06.str2 mkdir -p decoys rm decoys/read-pdb+servers.under cd decoys; shopt -s nullglob ; for x in ../*.ts-submitted* ; do echo ReadConformPDB $x >> read-pdb+servers.under ; done cd decoys; shopt -s nullglob ; for x in *.pdb* ; do echo ReadConformPDB $x >> read-pdb+servers.under ; done cd decoys; shopt -s nullglob ; for x in ../*mer/decoys/*.pdb* ; \ do echo ReadConformPDB $x chain A >> read-pdb+servers.under ; \ y=${x#../} ;\ z=${y/decoys} ;\ a=${z/T0298.} ;\ b=${a%.gz} ;\ c=${b%.pdb} ;\ echo NameConform $c >> read-pdb+servers.under ; \ done cd decoys; shopt -s nullglob ; for x in servers/*.pdb.gz ; do \ echo ReadConformPDB $x >> read-pdb+servers.under ; \ y=${x%.pdb.gz} ; \ z=${y#servers/} ; \ echo NameConform $z >> read-pdb+servers.under ; \ echo SCWRLConform >> read-pdb+servers.under ; \ echo NameConform $z-scwrl >> read-pdb+servers.under ; \ done chgrp protein decoys/read-pdb+servers.under chmod g+w decoys/read-pdb+servers.under rm -f decoys/evaluate.rdb sed -e s/XXX0000/T0298/ -e s/START_COL/1/ \ -e s/REAL_PDB/2hjsA/ \ -e s/_domain// \ -e s/read-pdb/read-pdb+servers/ \ -e 's/include COSTFCN.costfcn//' \ -e s/.COSTFCN// \ < /projects/compbio/experiments/protein-predict/casp7/starter-directory/evaluate.under \ | nice -2 /projects/compbio/programs/undertaker/undertaker # command:# Seed set to 1169753982 # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading monomeric-50pc.atoms # trans (non-proline) backbone unit: # CA= -2.2088 1.0126 -0.0031 # O= -0.1499 2.2440 0.0017 # C= -0.6889 1.1368 0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 0.0000 0.0000 # cis backbone unit: # CA= -0.1462 2.4515 0.0018 # O= -2.0272 0.9713 0.0022 # C= -0.8006 1.0755 0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4659 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2099 1.0634 -0.0014 # O= -0.1233 2.2459 0.0075 # C= -0.6871 1.1518 0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading monomeric-50pc.atoms have 448 chains in training database # Count of chains,residues,atoms: 448,112605,876684 # 109826 residues have no bad marker # 665 residues lack atoms needed to compute omega # 322 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 6 # HAS_OXT 325 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 523 # HAS_UNKNOWN_ATOMS 2 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 208 # NON_PLANAR_PEPTIDE 143 # BAD_PEPTIDE 1959 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-1332.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:CPU_time= 6.10307 sec, elapsed time= 6.25369 sec) # command:# Reading spots from monomeric-50pc-dry-5.spot Read prototypes from /projects/compbio/experiments/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-5.hist # created burial cost function dry5 with radius 5 with spots at monomeric-50pc-dry-5.spot # command:# Reading spots from monomeric-50pc-wet-6.5.spot Read prototypes from /projects/compbio/experiments/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-wet-6.5.hist # created burial cost function wet6.5 with radius 6.5 with spots at monomeric-50pc-wet-6.5.spot # command:# Reading spots from monomeric-50pc-dry-6.5.spot Read prototypes from /projects/compbio/experiments/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-6.5.hist # created burial cost function dry6.5 with radius 6.5 with spots at monomeric-50pc-dry-6.5.spot # command:# Reading spots from monomeric-50pc-generic-6.5.spot Read prototypes from /projects/compbio/experiments/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-generic-6.5.hist # created burial cost function gen6.5 with radius 6.5 with spots at monomeric-50pc-generic-6.5.spot # command:# Reading spots from near-backbone-center.spot # reading histogram from smoothed-near-backbone-2spot.hist # Reading spots from near-backbone-count.spot # created burial cost function near_backbone with radius 9.65 with spots at near-backbone-center.spot counting only near-backbone-count.spot # command:# Reading spots from way-back-center.spot # reading histogram from smoothed-way-back-2spot.hist # Reading spots from way-back-count.spot # created burial cost function way_back with radius 8.9 with spots at way-back-center.spot counting only way-back-count.spot # command:# Reading spots from monomeric-50pc-dry-8.spot Read prototypes from /projects/compbio/experiments/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-8.hist # created burial cost function dry8 with radius 8 with spots at monomeric-50pc-dry-8.spot # command:# Reading spots from monomeric-50pc-dry-10.spot Read prototypes from /projects/compbio/experiments/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-10.hist # created burial cost function dry10 with radius 10 with spots at monomeric-50pc-dry-10.spot # command:# Reading spots from monomeric-50pc-dry-12.spot Read prototypes from /projects/compbio/experiments/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-12.hist # created burial cost function dry12 with radius 12 with spots at monomeric-50pc-dry-12.spot # command:# reading histogram from dunbrack-2191-alpha.hist # created alpha cost function alpha with offset 0 and 360 bins # command:# reading histogram from dunbrack-2191-alpha-1.hist # created alpha cost function alpha_prev with offset -1 and 360 bins # command:# Prefix for input files set to /projects/compbio/lib/alphabet/ # command:# Read 3 alphabets from alpha.alphabet # command:CPU_time= 6.18206 sec, elapsed time= 6.47556 sec) # command:# Prefix for input files set to # command:# Making conformation for sequence T0298 numbered 1 through 336 Created new target T0298 from T0298.a2m # command:# command:# No conformations to remove in PopConform # command:# cleared Id set # command:# command:2hjsA expands to /projects/compbio/data/pdb/2hjs.pdb.gz 2hjsA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 555, because occupancy 5.0000000e-01 <= existing 0.500 in 2hjsA Skipped atom 557, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 559, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 561, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 563, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 565, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 730, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 732, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 734, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 736, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 738, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 740, because occupancy 0.500 <= existing 0.500 in 2hjsA Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 816, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 818, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 820, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 822, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 824, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 826, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 828, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 830, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 832, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1191, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1193, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1195, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1197, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1199, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1201, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1203, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1205, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1207, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1519, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1521, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1523, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1525, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1527, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1529, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1531, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1533, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1535, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1579, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1581, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1583, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1585, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1587, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1589, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1591, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1593, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1595, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1597, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1599, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1652, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1654, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1656, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1658, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1660, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1662, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1664, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1666, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1668, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1882, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1884, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1886, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1888, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1890, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1892, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1894, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1896, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1898, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1911, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1913, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1915, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1917, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1919, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1921, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1923, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1925, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 1927, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2029, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2031, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2033, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2035, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2037, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2039, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2041, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2043, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2045, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2059, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2061, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2063, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2065, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2067, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2069, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2071, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2073, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2075, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2102, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2104, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2106, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2108, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2110, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2112, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2114, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2116, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2118, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2124, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2126, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2128, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2130, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2132, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2134, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2136, because occupancy 0.500 <= existing 0.500 in 2hjsA Skipped atom 2138, because occupancy 0.500 <= existing 0.500 in 2hjsA Read 334 residues and 2468 atoms. # choosing archetypes in rotamer library # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # copying to AlignedFragments data structure # command:# Saving current conformation as real # command:# Prefix for output files set to decoys/ # command:# SetRealCost created real_cost = # ( 50 * real_hbond + 50 * real_hbond_u + 50 * decoy_hbond + 50 * decoy_hbond_u + 10 * real_NO_hbond + 10 * real_NO_hbond_u + 10 * decoy_NO_hbond + 10 * decoy_NO_hbond_u + 10 * knot + 200 * clens + 0 * rmsd + 35 * log_rmsd + 0 * rmsd_ca + 30 * log_rmsd_ca + 1 * GDT + 1 * smooth_GDT + 0.2 * missing_atoms ) # command:# SetCost created cost = # ) # command:CPU_time= 10.3764 sec, elapsed time= 10.7039 sec) # command:# Prefix for input files set to # command:# ReadConformPDB reading from PDB file model1.ts-submitted looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # command:# fraction of real conformation used = 1 # GDT_score = -74.8498 # GDT_score(maxd=8,maxw=2.9)= -78.3298 # GDT_score(maxd=8,maxw=3.2)= -74.4132 # GDT_score(maxd=8,maxw=3.5)= -70.4362 # GDT_score(maxd=10,maxw=3.8)= -73.2061 # GDT_score(maxd=10,maxw=4)= -70.6417 # GDT_score(maxd=10,maxw=4.2)= -68.0846 # GDT_score(maxd=12,maxw=4.3)= -71.9916 # GDT_score(maxd=12,maxw=4.5)= -69.5178 # GDT_score(maxd=12,maxw=4.7)= -67.1401 # GDT_score(maxd=14,maxw=5.2)= -65.5278 # GDT_score(maxd=14,maxw=5.5)= -62.4017 # command:# request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1833816060.pdb -s /var/tmp/to_scwrl_1833816060.seq -o /var/tmp/from_scwrl_1833816060.pdb > /var/tmp/scwrl_1833816060.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1833816060.pdb # conformation set from SCWRL output # command:# naming current conformation model1-scwrl # command:# Prefix for output files set to # command:superimposing iter= 0 total_weight= 3791.000 rmsd (weighted)= 3.102 (unweighted)= 9.616 superimposing iter= 1 total_weight= 9358.202 rmsd (weighted)= 1.473 (unweighted)= 9.679 superimposing iter= 2 total_weight= 4061.170 rmsd (weighted)= 1.126 (unweighted)= 9.705 superimposing iter= 3 total_weight= 2896.909 rmsd (weighted)= 1.032 (unweighted)= 9.716 superimposing iter= 4 total_weight= 2616.678 rmsd (weighted)= 0.996 (unweighted)= 9.722 superimposing iter= 5 total_weight= 2539.235 rmsd (weighted)= 0.977 (unweighted)= 9.725 # command:# Prefix for output files set to decoys/ # command:# ReadConformPDB reading from PDB file model2.ts-submitted looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # command:# fraction of real conformation used = 1 # GDT_score = -69.3694 # GDT_score(maxd=8,maxw=2.9)= -73.6099 # GDT_score(maxd=8,maxw=3.2)= -69.0006 # GDT_score(maxd=8,maxw=3.5)= -64.5681 # GDT_score(maxd=10,maxw=3.8)= -67.8463 # GDT_score(maxd=10,maxw=4)= -65.1545 # GDT_score(maxd=10,maxw=4.2)= -62.5532 # GDT_score(maxd=12,maxw=4.3)= -66.8303 # GDT_score(maxd=12,maxw=4.5)= -64.3032 # GDT_score(maxd=12,maxw=4.7)= -61.9148 # GDT_score(maxd=14,maxw=5.2)= -60.5935 # GDT_score(maxd=14,maxw=5.5)= -57.5472 # command:# request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1571823339.pdb -s /var/tmp/to_scwrl_1571823339.seq -o /var/tmp/from_scwrl_1571823339.pdb > /var/tmp/scwrl_1571823339.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1571823339.pdb # conformation set from SCWRL output # command:# naming current conformation model2-scwrl # command:# ReadConformPDB reading from PDB file model3.ts-submitted looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # command:# fraction of real conformation used = 1 # GDT_score = -73.048 # GDT_score(maxd=8,maxw=2.9)= -77.2189 # GDT_score(maxd=8,maxw=3.2)= -73.1803 # GDT_score(maxd=8,maxw=3.5)= -69.1492 # GDT_score(maxd=10,maxw=3.8)= -72.0303 # GDT_score(maxd=10,maxw=4)= -69.4539 # GDT_score(maxd=10,maxw=4.2)= -66.9124 # GDT_score(maxd=12,maxw=4.3)= -70.8775 # GDT_score(maxd=12,maxw=4.5)= -68.4152 # GDT_score(maxd=12,maxw=4.7)= -66.0581 # GDT_score(maxd=14,maxw=5.2)= -64.5298 # GDT_score(maxd=14,maxw=5.5)= -61.4464 # command:# request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_270956093.pdb -s /var/tmp/to_scwrl_270956093.seq -o /var/tmp/from_scwrl_270956093.pdb > /var/tmp/scwrl_270956093.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_270956093.pdb # conformation set from SCWRL output # command:# naming current conformation model3-scwrl # command:# ReadConformPDB reading from PDB file model4.ts-submitted looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # command:# fraction of real conformation used = 1 # GDT_score = -70.4955 # GDT_score(maxd=8,maxw=2.9)= -75.1519 # GDT_score(maxd=8,maxw=3.2)= -70.4048 # GDT_score(maxd=8,maxw=3.5)= -65.9048 # GDT_score(maxd=10,maxw=3.8)= -69.0885 # GDT_score(maxd=10,maxw=4)= -66.31 # GDT_score(maxd=10,maxw=4.2)= -63.6763 # GDT_score(maxd=12,maxw=4.3)= -67.9015 # GDT_score(maxd=12,maxw=4.5)= -65.3579 # GDT_score(maxd=12,maxw=4.7)= -62.9509 # GDT_score(maxd=14,maxw=5.2)= -61.5403 # GDT_score(maxd=14,maxw=5.5)= -58.4531 # command:# request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_23831744.pdb -s /var/tmp/to_scwrl_23831744.seq -o /var/tmp/from_scwrl_23831744.pdb > /var/tmp/scwrl_23831744.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_23831744.pdb # conformation set from SCWRL output # command:# naming current conformation model4-scwrl # command:# ReadConformPDB reading from PDB file model5.ts-submitted looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # command:# fraction of real conformation used = 1 # GDT_score = -69.2943 # GDT_score(maxd=8,maxw=2.9)= -73.3301 # GDT_score(maxd=8,maxw=3.2)= -68.742 # GDT_score(maxd=8,maxw=3.5)= -64.3236 # GDT_score(maxd=10,maxw=3.8)= -67.6235 # GDT_score(maxd=10,maxw=4)= -64.9194 # GDT_score(maxd=10,maxw=4.2)= -62.322 # GDT_score(maxd=12,maxw=4.3)= -66.6082 # GDT_score(maxd=12,maxw=4.5)= -64.0881 # GDT_score(maxd=12,maxw=4.7)= -61.7013 # GDT_score(maxd=14,maxw=5.2)= -60.3898 # GDT_score(maxd=14,maxw=5.5)= -57.3853 # command:# request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_624796598.pdb -s /var/tmp/to_scwrl_624796598.seq -o /var/tmp/from_scwrl_624796598.pdb > /var/tmp/scwrl_624796598.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_624796598.pdb # conformation set from SCWRL output # command:# naming current conformation model5-scwrl # command:# Prefix for input files set to decoys/ # command:# ReadConformPDB reading from PDB file T0298.try1-opt2.pdb looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # command:# fraction of real conformation used = 1 # GDT_score = -70.6456 # GDT_score(maxd=8,maxw=2.9)= -75.1234 # GDT_score(maxd=8,maxw=3.2)= -70.3519 # GDT_score(maxd=8,maxw=3.5)= -65.8316 # GDT_score(maxd=10,maxw=3.8)= -69.0173 # GDT_score(maxd=10,maxw=4)= -66.245 # GDT_score(maxd=10,maxw=4.2)= -63.613 # GDT_score(maxd=12,maxw=4.3)= -67.8399 # GDT_score(maxd=12,maxw=4.5)= -65.2979 # GDT_score(maxd=12,maxw=4.7)= -62.8946 # GDT_score(maxd=14,maxw=5.2)= -61.4851 # GDT_score(maxd=14,maxw=5.5)= -58.3966 # command:# Prefix for output files set to # command:superimposing iter= 0 total_weight= 3791.000 rmsd (weighted)= 3.257 (unweighted)= 9.550 superimposing iter= 1 total_weight= 9264.691 rmsd (weighted)= 1.593 (unweighted)= 9.586 superimposing iter= 2 total_weight= 3490.159 rmsd (weighted)= 1.325 (unweighted)= 9.598 superimposing iter= 3 total_weight= 2627.666 rmsd (weighted)= 1.275 (unweighted)= 9.605 superimposing iter= 4 total_weight= 2489.211 rmsd (weighted)= 1.263 (unweighted)= 9.610 superimposing iter= 5 total_weight= 2466.292 rmsd (weighted)= 1.257 (unweighted)= 9.614 # command:# Prefix for output files set to decoys/ # command:# Prefix for input files set to # command:# ReadConformPDB reading from PDB file T0298.undertaker-align.pdb looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # command:# naming current conformation align1 # command:# fraction of real conformation used = 0.978979 # GDT_score = -67.6426 # GDT_score(maxd=8,maxw=2.9)= -71.6906 # GDT_score(maxd=8,maxw=3.2)= -67.328 # GDT_score(maxd=8,maxw=3.5)= -63.1096 # GDT_score(maxd=10,maxw=3.8)= -66.3042 # GDT_score(maxd=10,maxw=4)= -63.6784 # GDT_score(maxd=10,maxw=4.2)= -61.1594 # GDT_score(maxd=12,maxw=4.3)= -65.3262 # GDT_score(maxd=12,maxw=4.5)= -62.8804 # GDT_score(maxd=12,maxw=4.7)= -60.5424 # GDT_score(maxd=14,maxw=5.2)= -59.2467 # GDT_score(maxd=14,maxw=5.5)= -56.3137 # command:# ReadConformPDB reading from PDB file T0298.undertaker-align.pdb looking for model 2 WARNING: atoms too close: (T0298)L36.C and (T0298)L37.C only 0.000 apart, marking (T0298)L37.C as missing WARNING: atoms too close: (T0298)L37.N and (T0298)A38.N only 0.000 apart, marking (T0298)L37.N as missing WARNING: atoms too close: (T0298)L37.CA and (T0298)A38.CA only 0.000 apart, marking (T0298)L37.CA as missing WARNING: atoms too close: (T0298)G167.C and (T0298)P183.C only 0.000 apart, marking (T0298)P183.C as missing WARNING: atoms too close: (T0298)V168.N and (T0298)L184.N only 0.000 apart, marking (T0298)V168.N as missing WARNING: atoms too close: (T0298)V168.CA and (T0298)L184.CA only 0.000 apart, marking (T0298)V168.CA as missing WARNING: atoms too close: (T0298)D190.C and (T0298)A194.C only 0.000 apart, marking (T0298)A194.C as missing WARNING: atoms too close: (T0298)R191.N and (T0298)F195.N only 0.000 apart, marking (T0298)R191.N as missing WARNING: atoms too close: (T0298)R191.CA and (T0298)F195.CA only 0.000 apart, marking (T0298)R191.CA as missing WARNING: atoms too close: (T0298)V201.C and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)G202.N and (T0298)S210.N only 0.000 apart, marking (T0298)G202.N as missing WARNING: atoms too close: (T0298)G202.CA and (T0298)S210.CA only 0.000 apart, marking (T0298)G202.CA as missing WARNING: atoms too close: (T0298)Q301.C and (T0298)D303.C only 0.000 apart, marking (T0298)D303.C as missing WARNING: atoms too close: (T0298)A302.N and (T0298)P304.N only 0.000 apart, marking (T0298)A302.N as missing WARNING: atoms too close: (T0298)A302.CA and (T0298)P304.CA only 0.000 apart, marking (T0298)A302.CA as missing # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # command:# naming current conformation align2 # command:# fraction of real conformation used = 0.885886 # GDT_score = -63.7387 # GDT_score(maxd=8,maxw=2.9)= -67.5727 # GDT_score(maxd=8,maxw=3.2)= -64.0184 # GDT_score(maxd=8,maxw=3.5)= -60.4435 # GDT_score(maxd=10,maxw=3.8)= -62.7981 # GDT_score(maxd=10,maxw=4)= -60.5875 # GDT_score(maxd=10,maxw=4.2)= -58.4343 # GDT_score(maxd=12,maxw=4.3)= -61.8031 # GDT_score(maxd=12,maxw=4.5)= -59.7197 # GDT_score(maxd=12,maxw=4.7)= -57.7251 # GDT_score(maxd=14,maxw=5.2)= -56.5221 # GDT_score(maxd=14,maxw=5.5)= -53.9175 # command:# ReadConformPDB reading from PDB file T0298.undertaker-align.pdb looking for model 3 WARNING: atoms too close: (T0298)D25.C and (T0298)R27.C only 0.000 apart, marking (T0298)R27.C as missing WARNING: atoms too close: (T0298)E26.N and (T0298)D28.N only 0.000 apart, marking (T0298)E26.N as missing WARNING: atoms too close: (T0298)E26.CA and (T0298)D28.CA only 0.000 apart, marking (T0298)E26.CA as missing WARNING: atoms too close: (T0298)A118.C and (T0298)A121.C only 0.000 apart, marking (T0298)A121.C as missing WARNING: atoms too close: (T0298)S119.N and (T0298)A122.N only 0.000 apart, marking (T0298)S119.N as missing WARNING: atoms too close: (T0298)S119.CA and (T0298)A122.CA only 0.000 apart, marking (T0298)S119.CA as missing WARNING: atoms too close: (T0298)A134.C and (T0298)E135.C only 0.000 apart, marking (T0298)E135.C as missing WARNING: atoms too close: (T0298)E135.N and (T0298)L136.N only 0.000 apart, marking (T0298)E135.N as missing WARNING: atoms too close: (T0298)E135.CA and (T0298)L136.CA only 0.000 apart, marking (T0298)E135.CA as missing WARNING: atoms too close: (T0298)R173.C and (T0298)E177.C only 0.000 apart, marking (T0298)E177.C as missing WARNING: atoms too close: (T0298)Q174.N and (T0298)L178.N only 0.000 apart, marking (T0298)Q174.N as missing WARNING: atoms too close: (T0298)Q174.CA and (T0298)L178.CA only 0.000 apart, marking (T0298)Q174.CA as missing WARNING: atoms too close: (T0298)L184.C and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)E185.N and (T0298)D205.N only 0.000 apart, marking (T0298)E185.N as missing WARNING: atoms too close: (T0298)E185.CA and (T0298)D205.CA only 0.000 apart, marking (T0298)E185.CA as missing WARNING: atoms too close: (T0298)V220.C and (T0298)L224.C only 0.000 apart, marking (T0298)L224.C as missing WARNING: atoms too close: (T0298)Q221.N and (T0298)G225.N only 0.000 apart, marking (T0298)Q221.N as missing WARNING: atoms too close: (T0298)Q221.CA and (T0298)G225.CA only 0.000 apart, marking (T0298)Q221.CA as missing WARNING: atoms too close: (T0298)V283.C and (T0298)G284.C only 0.000 apart, marking (T0298)G284.C as missing WARNING: atoms too close: (T0298)G284.N and (T0298)D285.N only 0.000 apart, marking (T0298)G284.N as missing WARNING: atoms too close: (T0298)G284.CA and (T0298)D285.CA only 0.000 apart, marking (T0298)G284.CA as missing WARNING: atoms too close: (T0298)G295.C and (T0298)R296.C only 0.000 apart, marking (T0298)R296.C as missing WARNING: atoms too close: (T0298)R296.N and (T0298)V297.N only 0.000 apart, marking (T0298)R296.N as missing WARNING: atoms too close: (T0298)R296.CA and (T0298)V297.CA only 0.000 apart, marking (T0298)R296.CA as missing WARNING: atoms too close: (T0298)Q301.C and (T0298)A302.C only 0.000 apart, marking (T0298)A302.C as missing WARNING: atoms too close: (T0298)A302.N and (T0298)D303.N only 0.000 apart, marking (T0298)A302.N as missing WARNING: atoms too close: (T0298)A302.CA and (T0298)D303.CA only 0.000 apart, marking (T0298)A302.CA as missing # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # command:# naming current conformation align3 # command:# ReadConformPDB reading from PDB file T0298.undertaker-align.pdb looking for model 4 WARNING: atoms too close: (T0298)G11.C and (T0298)A12.C only 0.000 apart, marking (T0298)A12.C as missing WARNING: atoms too close: (T0298)A12.N and (T0298)T13.N only 0.000 apart, marking (T0298)A12.N as missing WARNING: atoms too close: (T0298)A12.CA and (T0298)T13.CA only 0.000 apart, marking (T0298)A12.CA as missing WARNING: atoms too close: (T0298)I94.C and (T0298)D95.C only 0.000 apart, marking (T0298)D95.C as missing WARNING: atoms too close: (T0298)D95.N and (T0298)L96.N only 0.000 apart, marking (T0298)D95.N as missing WARNING: atoms too close: (T0298)D95.CA and (T0298)L96.CA only 0.000 apart, marking (T0298)D95.CA as missing WARNING: atoms too close: (T0298)E101.C and (T0298)P102.C only 0.000 apart, marking (T0298)P102.C as missing WARNING: atoms too close: (T0298)P102.N and (T0298)S103.N only 0.000 apart, marking (T0298)P102.N as missing WARNING: atoms too close: (T0298)P102.CA and (T0298)S103.CA only 0.000 apart, marking (T0298)P102.CA as missing WARNING: atoms too close: (T0298)S119.C and (T0298)A121.C only 0.000 apart, marking (T0298)A121.C as missing WARNING: atoms too close: (T0298)Q120.N and (T0298)A122.N only 0.000 apart, marking (T0298)Q120.N as missing WARNING: atoms too close: (T0298)Q120.CA and (T0298)A122.CA only 0.000 apart, marking (T0298)Q120.CA as missing WARNING: atoms too close: (T0298)A134.C and (T0298)E135.C only 0.000 apart, marking (T0298)E135.C as missing WARNING: atoms too close: (T0298)E135.N and (T0298)L136.N only 0.000 apart, marking (T0298)E135.N as missing WARNING: atoms too close: (T0298)E135.CA and (T0298)L136.CA only 0.000 apart, marking (T0298)E135.CA as missing WARNING: atoms too close: (T0298)L163.C and (T0298)T175.C only 0.000 apart, marking (T0298)T175.C as missing WARNING: atoms too close: (T0298)G164.N and (T0298)A176.N only 0.000 apart, marking (T0298)G164.N as missing WARNING: atoms too close: (T0298)G164.CA and (T0298)A176.CA only 0.000 apart, marking (T0298)G164.CA as missing WARNING: atoms too close: (T0298)A199.C and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)Q200.N and (T0298)D205.N only 0.000 apart, marking (T0298)Q200.N as missing WARNING: atoms too close: (T0298)Q200.CA and (T0298)D205.CA only 0.000 apart, marking (T0298)Q200.CA as missing WARNING: atoms too close: (T0298)A222.C and (T0298)G229.C only 0.000 apart, marking (T0298)G229.C as missing WARNING: atoms too close: (T0298)L223.N and (T0298)P230.N only 0.000 apart, marking (T0298)L223.N as missing WARNING: atoms too close: (T0298)L223.CA and (T0298)P230.CA only 0.000 apart, marking (T0298)L223.CA as missing WARNING: atoms too close: (T0298)N315.C and (T0298)V316.C only 0.000 apart, marking (T0298)V316.C as missing WARNING: atoms too close: (T0298)V316.N and (T0298)R317.N only 0.000 apart, marking (T0298)V316.N as missing WARNING: atoms too close: (T0298)V316.CA and (T0298)R317.CA only 0.000 apart, marking (T0298)V316.CA as missing # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # command:# naming current conformation align4 # command:# ReadConformPDB reading from PDB file T0298.undertaker-align.pdb looking for model 5 WARNING: atoms too close: (T0298)G11.C and (T0298)A12.C only 0.000 apart, marking (T0298)A12.C as missing WARNING: atoms too close: (T0298)A12.N and (T0298)T13.N only 0.000 apart, marking (T0298)A12.N as missing WARNING: atoms too close: (T0298)A12.CA and (T0298)T13.CA only 0.000 apart, marking (T0298)A12.CA as missing WARNING: atoms too close: (T0298)I94.C and (T0298)D95.C only 0.000 apart, marking (T0298)D95.C as missing WARNING: atoms too close: (T0298)D95.N and (T0298)L96.N only 0.000 apart, marking (T0298)D95.N as missing WARNING: atoms too close: (T0298)D95.CA and (T0298)L96.CA only 0.000 apart, marking (T0298)D95.CA as missing WARNING: atoms too close: (T0298)S119.C and (T0298)A121.C only 0.000 apart, marking (T0298)A121.C as missing WARNING: atoms too close: (T0298)Q120.N and (T0298)A122.N only 0.000 apart, marking (T0298)Q120.N as missing WARNING: atoms too close: (T0298)Q120.CA and (T0298)A122.CA only 0.000 apart, marking (T0298)Q120.CA as missing WARNING: atoms too close: (T0298)A134.C and (T0298)E135.C only 0.000 apart, marking (T0298)E135.C as missing WARNING: atoms too close: (T0298)E135.N and (T0298)L136.N only 0.000 apart, marking (T0298)E135.N as missing WARNING: atoms too close: (T0298)E135.CA and (T0298)L136.CA only 0.000 apart, marking (T0298)E135.CA as missing WARNING: atoms too close: (T0298)L163.C and (T0298)T175.C only 0.000 apart, marking (T0298)T175.C as missing WARNING: atoms too close: (T0298)G164.N and (T0298)A176.N only 0.000 apart, marking (T0298)G164.N as missing WARNING: atoms too close: (T0298)G164.CA and (T0298)A176.CA only 0.000 apart, marking (T0298)G164.CA as missing WARNING: atoms too close: (T0298)A199.C and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)Q200.N and (T0298)D205.N only 0.000 apart, marking (T0298)Q200.N as missing WARNING: atoms too close: (T0298)Q200.CA and (T0298)D205.CA only 0.000 apart, marking (T0298)Q200.CA as missing WARNING: atoms too close: (T0298)A222.C and (T0298)G229.C only 0.000 apart, marking (T0298)G229.C as missing WARNING: atoms too close: (T0298)L223.N and (T0298)P230.N only 0.000 apart, marking (T0298)L223.N as missing WARNING: atoms too close: (T0298)L223.CA and (T0298)P230.CA only 0.000 apart, marking (T0298)L223.CA as missing WARNING: atoms too close: (T0298)N315.C and (T0298)V316.C only 0.000 apart, marking (T0298)V316.C as missing WARNING: atoms too close: (T0298)V316.N and (T0298)R317.N only 0.000 apart, marking (T0298)V316.N as missing WARNING: atoms too close: (T0298)V316.CA and (T0298)R317.CA only 0.000 apart, marking (T0298)V316.CA as missing # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # command:# naming current conformation align5 # command:# Prefix for input files set to decoys/ # command:# reading script from file read-pdb+servers.under # ReadConformPDB reading from PDB file ../model1.ts-submitted looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file ../model2.ts-submitted looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file ../model3.ts-submitted looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file ../model4.ts-submitted looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file ../model5.ts-submitted looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try1-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try1-opt1.pdb.gz looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try1-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try1-opt2.pdb.gz looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try1-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try2-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 296 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try2-opt1.pdb.gz looking for model 1 # Found a chain break before 296 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try2-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 281 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try2-opt2.pdb.gz looking for model 1 # Found a chain break before 319 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try2-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 319 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try3-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 315 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try3-opt1.pdb.gz looking for model 1 # Found a chain break before 315 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try3-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 277 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try3-opt2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try3-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try4-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 288 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try4-opt1.pdb.gz looking for model 1 # Found a chain break before 288 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try4-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 309 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try4-opt2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try4-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try5-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 277 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try5-opt1.pdb.gz looking for model 1 # Found a chain break before 277 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try5-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 279 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try5-opt2.pdb.gz looking for model 1 # Found a chain break before 300 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try5-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 300 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try6-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try6-opt1.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try6-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 270 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try6-opt2.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try6-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try7-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try7-opt1.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try7-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 270 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try7-opt2.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try7-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try8-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try8-opt1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try8-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 321 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try8-opt2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try8-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try9-opt1-scwrl.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try9-opt1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try9-opt2.gromacs0.pdb.gz looking for model 1 # Found a chain break before 305 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try9-opt2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file T0298.try9-opt2.repack-nonPC.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file from-dimer-try1-opt2-A.pdb.gz looking for model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file ../dimer/decoys/T0298.try1-opt1-scwrl.pdb.gz looking for chain 'A' model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # naming current conformation dimer//try1-opt1-scwrl # ReadConformPDB reading from PDB file ../dimer/decoys/T0298.try1-opt1.pdb.gz looking for chain 'A' model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # naming current conformation dimer//try1-opt1 # ReadConformPDB reading from PDB file ../dimer/decoys/T0298.try1-opt2.gromacs0.pdb.gz looking for chain 'A' model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation dimer//try1-opt2.gromacs0 # ReadConformPDB reading from PDB file ../dimer/decoys/T0298.try1-opt2.pdb.gz looking for chain 'A' model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # naming current conformation dimer//try1-opt2 # ReadConformPDB reading from PDB file ../dimer/decoys/T0298.try1-opt2.repack-nonPC.pdb.gz looking for chain 'A' model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # naming current conformation dimer//try1-opt2.repack-nonPC # ReadConformPDB reading from PDB file ../dimer/decoys/T0298.try1-opt2.unpack.pdb.gz looking for chain 'A' model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # naming current conformation dimer//try1-opt2.unpack # ReadConformPDB reading from PDB file ../dimer/decoys/dimer-try7-1t4bA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 286 # copying to AlignedFragments data structure # naming current conformation dimer//dimer-try7-1t4bA # ReadConformPDB reading from PDB file ../dimer/decoys/dimer-try8-1t4bA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation dimer//dimer-try8-1t4bA # ReadConformPDB reading from PDB file ../dimer/decoys/dimer-try9-1t4bA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation dimer//dimer-try9-1t4bA # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1923645233.pdb -s /var/tmp/to_scwrl_1923645233.seq -o /var/tmp/from_scwrl_1923645233.pdb > /var/tmp/scwrl_1923645233.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1923645233.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_POPULUS_TS1-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1396580968.pdb -s /var/tmp/to_scwrl_1396580968.seq -o /var/tmp/from_scwrl_1396580968.pdb > /var/tmp/scwrl_1396580968.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1396580968.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_POPULUS_TS2-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_364081531.pdb -s /var/tmp/to_scwrl_364081531.seq -o /var/tmp/from_scwrl_364081531.pdb > /var/tmp/scwrl_364081531.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_364081531.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_POPULUS_TS3-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_422544514.pdb -s /var/tmp/to_scwrl_422544514.seq -o /var/tmp/from_scwrl_422544514.pdb > /var/tmp/scwrl_422544514.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_422544514.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_POPULUS_TS4-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_869193006.pdb -s /var/tmp/to_scwrl_869193006.seq -o /var/tmp/from_scwrl_869193006.pdb > /var/tmp/scwrl_869193006.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_869193006.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_POPULUS_TS5-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1432103209.pdb -s /var/tmp/to_scwrl_1432103209.seq -o /var/tmp/from_scwrl_1432103209.pdb > /var/tmp/scwrl_1432103209.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1432103209.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_RECOM_TS1-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1429488475.pdb -s /var/tmp/to_scwrl_1429488475.seq -o /var/tmp/from_scwrl_1429488475.pdb > /var/tmp/scwrl_1429488475.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1429488475.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_RECOM_TS2-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1488058374.pdb -s /var/tmp/to_scwrl_1488058374.seq -o /var/tmp/from_scwrl_1488058374.pdb > /var/tmp/scwrl_1488058374.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1488058374.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_RECOM_TS3-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_474772408.pdb -s /var/tmp/to_scwrl_474772408.seq -o /var/tmp/from_scwrl_474772408.pdb > /var/tmp/scwrl_474772408.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_474772408.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_RECOM_TS4-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1619099806.pdb -s /var/tmp/to_scwrl_1619099806.seq -o /var/tmp/from_scwrl_1619099806.pdb > /var/tmp/scwrl_1619099806.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1619099806.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_RECOM_TS5-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_384549407.pdb -s /var/tmp/to_scwrl_384549407.seq -o /var/tmp/from_scwrl_384549407.pdb > /var/tmp/scwrl_384549407.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_384549407.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_TS1-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1342319810.pdb -s /var/tmp/to_scwrl_1342319810.seq -o /var/tmp/from_scwrl_1342319810.pdb > /var/tmp/scwrl_1342319810.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1342319810.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_TS2-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1534959162.pdb -s /var/tmp/to_scwrl_1534959162.seq -o /var/tmp/from_scwrl_1534959162.pdb > /var/tmp/scwrl_1534959162.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1534959162.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_TS3-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_100375182.pdb -s /var/tmp/to_scwrl_100375182.seq -o /var/tmp/from_scwrl_100375182.pdb > /var/tmp/scwrl_100375182.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_100375182.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_TS4-scwrl # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_251692904.pdb -s /var/tmp/to_scwrl_251692904.seq -o /var/tmp/from_scwrl_251692904.pdb > /var/tmp/scwrl_251692904.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_251692904.pdb # conformation set from SCWRL output # naming current conformation 3D-JIGSAW_TS5-scwrl # ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1627605590.pdb -s /var/tmp/to_scwrl_1627605590.seq -o /var/tmp/from_scwrl_1627605590.pdb > /var/tmp/scwrl_1627605590.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1627605590.pdb # conformation set from SCWRL output # naming current conformation 3Dpro_TS1-scwrl # ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1 # Found a chain break before 334 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_772409102.pdb -s /var/tmp/to_scwrl_772409102.seq -o /var/tmp/from_scwrl_772409102.pdb > /var/tmp/scwrl_772409102.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_772409102.pdb # conformation set from SCWRL output # naming current conformation 3Dpro_TS2-scwrl # ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1 # Found a chain break before 305 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_145434012.pdb -s /var/tmp/to_scwrl_145434012.seq -o /var/tmp/from_scwrl_145434012.pdb > /var/tmp/scwrl_145434012.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_145434012.pdb # conformation set from SCWRL output # naming current conformation 3Dpro_TS3-scwrl # ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1 # Found a chain break before 235 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1575298561.pdb -s /var/tmp/to_scwrl_1575298561.seq -o /var/tmp/from_scwrl_1575298561.pdb > /var/tmp/scwrl_1575298561.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1575298561.pdb # conformation set from SCWRL output # naming current conformation 3Dpro_TS4-scwrl # ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1 # Found a chain break before 331 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1978444012.pdb -s /var/tmp/to_scwrl_1978444012.seq -o /var/tmp/from_scwrl_1978444012.pdb > /var/tmp/scwrl_1978444012.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1978444012.pdb # conformation set from SCWRL output # naming current conformation 3Dpro_TS5-scwrl # ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_536300710.pdb -s /var/tmp/to_scwrl_536300710.seq -o /var/tmp/from_scwrl_536300710.pdb > /var/tmp/scwrl_536300710.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_536300710.pdb # conformation set from SCWRL output # naming current conformation ABIpro_TS1-scwrl # ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1101411330.pdb -s /var/tmp/to_scwrl_1101411330.seq -o /var/tmp/from_scwrl_1101411330.pdb > /var/tmp/scwrl_1101411330.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1101411330.pdb # conformation set from SCWRL output # naming current conformation ABIpro_TS2-scwrl # ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2015110115.pdb -s /var/tmp/to_scwrl_2015110115.seq -o /var/tmp/from_scwrl_2015110115.pdb > /var/tmp/scwrl_2015110115.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2015110115.pdb # conformation set from SCWRL output # naming current conformation ABIpro_TS3-scwrl # ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1 # Found a chain break before 324 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1467424708.pdb -s /var/tmp/to_scwrl_1467424708.seq -o /var/tmp/from_scwrl_1467424708.pdb > /var/tmp/scwrl_1467424708.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1467424708.pdb # conformation set from SCWRL output # naming current conformation ABIpro_TS4-scwrl # ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1 # Found a chain break before 321 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_103237843.pdb -s /var/tmp/to_scwrl_103237843.seq -o /var/tmp/from_scwrl_103237843.pdb > /var/tmp/scwrl_103237843.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_103237843.pdb # conformation set from SCWRL output # naming current conformation ABIpro_TS5-scwrl # ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation BayesHH_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_430716779.pdb -s /var/tmp/to_scwrl_430716779.seq -o /var/tmp/from_scwrl_430716779.pdb > /var/tmp/scwrl_430716779.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_430716779.pdb # conformation set from SCWRL output # naming current conformation BayesHH_TS1-scwrl # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1 # Found a chain break before 332 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1153757122.pdb -s /var/tmp/to_scwrl_1153757122.seq -o /var/tmp/from_scwrl_1153757122.pdb > /var/tmp/scwrl_1153757122.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1153757122.pdb # conformation set from SCWRL output # naming current conformation Bilab-ENABLE_TS1-scwrl # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1675061182.pdb -s /var/tmp/to_scwrl_1675061182.seq -o /var/tmp/from_scwrl_1675061182.pdb > /var/tmp/scwrl_1675061182.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1675061182.pdb # conformation set from SCWRL output # naming current conformation Bilab-ENABLE_TS2-scwrl # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_701672872.pdb -s /var/tmp/to_scwrl_701672872.seq -o /var/tmp/from_scwrl_701672872.pdb > /var/tmp/scwrl_701672872.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_701672872.pdb # conformation set from SCWRL output # naming current conformation Bilab-ENABLE_TS3-scwrl # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1177588866.pdb -s /var/tmp/to_scwrl_1177588866.seq -o /var/tmp/from_scwrl_1177588866.pdb > /var/tmp/scwrl_1177588866.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1177588866.pdb # conformation set from SCWRL output # naming current conformation Bilab-ENABLE_TS4-scwrl # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_152374133.pdb -s /var/tmp/to_scwrl_152374133.seq -o /var/tmp/from_scwrl_152374133.pdb > /var/tmp/scwrl_152374133.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_152374133.pdb # conformation set from SCWRL output # naming current conformation Bilab-ENABLE_TS5-scwrl # ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1 # Found a chain break before 328 # copying to AlignedFragments data structure # naming current conformation CIRCLE_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_477834458.pdb -s /var/tmp/to_scwrl_477834458.seq -o /var/tmp/from_scwrl_477834458.pdb > /var/tmp/scwrl_477834458.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_477834458.pdb # conformation set from SCWRL output # naming current conformation CIRCLE_TS1-scwrl # ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_426686189.pdb -s /var/tmp/to_scwrl_426686189.seq -o /var/tmp/from_scwrl_426686189.pdb > /var/tmp/scwrl_426686189.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_426686189.pdb # conformation set from SCWRL output # naming current conformation CIRCLE_TS2-scwrl # ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_516455665.pdb -s /var/tmp/to_scwrl_516455665.seq -o /var/tmp/from_scwrl_516455665.pdb > /var/tmp/scwrl_516455665.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_516455665.pdb # conformation set from SCWRL output # naming current conformation CIRCLE_TS3-scwrl # ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation CIRCLE_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_900378972.pdb -s /var/tmp/to_scwrl_900378972.seq -o /var/tmp/from_scwrl_900378972.pdb > /var/tmp/scwrl_900378972.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_900378972.pdb # conformation set from SCWRL output # naming current conformation CIRCLE_TS4-scwrl # ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1295879194.pdb -s /var/tmp/to_scwrl_1295879194.seq -o /var/tmp/from_scwrl_1295879194.pdb > /var/tmp/scwrl_1295879194.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1295879194.pdb # conformation set from SCWRL output # naming current conformation CIRCLE_TS5-scwrl # ReadConformPDB reading from PDB file servers/CPHmodels_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CPHmodels_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1948558874.pdb -s /var/tmp/to_scwrl_1948558874.seq -o /var/tmp/from_scwrl_1948558874.pdb > /var/tmp/scwrl_1948558874.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1948558874.pdb # conformation set from SCWRL output # naming current conformation CPHmodels_TS1-scwrl # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_182383800.pdb -s /var/tmp/to_scwrl_182383800.seq -o /var/tmp/from_scwrl_182383800.pdb > /var/tmp/scwrl_182383800.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_182383800.pdb # conformation set from SCWRL output # naming current conformation CaspIta-FOX_TS1-scwrl # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1 WARNING: atoms too close: (T0298)G202.C and (T0298)A203.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A203.CA only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A203.CA only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A203.CB only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A203.CB only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A203.CB only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A203.O only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A203.O only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A203.O only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A203.O only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A203.C only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A203.C only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A203.C only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A203.C only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A203.C only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)V204.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)V204.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)V204.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)V204.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)V204.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)V204.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)V204.N and (T0298)V204.CA only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)V204.CA only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)V204.CA only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)V204.CA only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)V204.CA only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)V204.CA only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)V204.CA only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)V204.CB only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)V204.CB only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)V204.CB only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)V204.CB only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)V204.CB only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)V204.CB only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)V204.CB only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)V204.CB only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)V204.CG1 only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)V204.CG2 only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)V204.O only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)V204.C only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)D205.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)D205.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)D205.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)D205.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)D205.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)D205.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)D205.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)D205.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)D205.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)D205.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)D205.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)D205.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)D205.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)D205.N and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)D205.CA only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.N and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)V204.C and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)V204.O and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)D205.CB only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.N and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)V204.C and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)V204.O and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)V204.N and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)A203.C and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)A203.O and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)A203.N and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)G202.C and (T0298)D205.CG only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)D205.OD1 only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)D205.OD2 only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)D205.O only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)D205.C only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A206.N only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A206.N only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A206.N only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A206.N only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A206.N only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A206.N only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A206.N only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A206.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A206.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A206.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A206.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A206.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A206.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A206.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A206.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A206.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A206.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A206.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A206.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A206.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A206.N only 0.000 apart, marking (T0298)A206.N as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A206.CA only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A206.CB only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A206.O only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.O and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A206.C only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.N only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.N only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.N only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.N only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.N only 0.000 apart, marking (T0298)A206.N as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.N only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.N only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.N only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.N only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.N only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.N only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.N only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.N only 0.000 apart, marking (T0298)E207.N as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.CA only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.CB only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.CG only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.CD only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.OE1 only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.OE2 only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.O only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E207.C only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.C and (T0298)G208.N only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)G208.N only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)G208.N only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)G208.N only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)G208.N only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)G208.N only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)G208.N only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)G208.N only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)G208.N only 0.000 apart, marking (T0298)E207.N as missing WARNING: atoms too close: (T0298)A206.C and (T0298)G208.N only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)G208.N only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)G208.N only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)G208.N only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)G208.N only 0.000 apart, marking (T0298)A206.N as missing WARNING: atoms too close: (T0298)D205.C and (T0298)G208.N only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)G208.N only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)G208.N only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)G208.N only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)G208.N only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)G208.N only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)G208.N only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)G208.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)V204.C and (T0298)G208.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)G208.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)G208.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)G208.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)G208.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)G208.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)G208.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)G208.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)G208.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)G208.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)G208.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)G208.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)G208.N only 0.000 apart, marking (T0298)G208.N as missing WARNING: atoms too close: (T0298)G208.N and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.C and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.O and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A206.C and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A206.O and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)D205.C and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)D205.O and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)G208.CA only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)G208.N and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.C and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.O and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)E207.N and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A206.C and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A206.O and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A206.N and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)D205.C and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)G208.O only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)G208.O and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G208.N and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.C and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)E207.N and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A206.C and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A206.N and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)G208.C only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.N only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.N only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.N only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.N only 0.000 apart, marking (T0298)G208.N as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.N only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.N only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.N only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.N only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.N only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.N only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.N only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.N only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.N only 0.000 apart, marking (T0298)E207.N as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.N only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.N only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.N only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.N only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.N only 0.000 apart, marking (T0298)A206.N as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.N only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.N only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.N only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.N only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.N only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.N only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.N only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.N only 0.000 apart, marking (T0298)H209.N as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.CA only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.CB only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.CG only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.CD2 only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.ND1 only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.CE1 only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.NE2 only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.O only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.O and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.N and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)G208.C and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)G208.N and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.C and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)E207.N and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A206.C and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A206.N and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)H209.C only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.C and (T0298)S210.N only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.O and (T0298)S210.N only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)S210.N only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)S210.N only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)S210.N only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)S210.N only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)S210.N only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)S210.N only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)S210.N only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)H209.N and (T0298)S210.N only 0.000 apart, marking (T0298)H209.N as missing WARNING: atoms too close: (T0298)G208.C and (T0298)S210.N only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)S210.N only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)S210.N only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)S210.N only 0.000 apart, marking (T0298)G208.N as missing WARNING: atoms too close: (T0298)E207.C and (T0298)S210.N only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)S210.N only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)S210.N only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)S210.N only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)S210.N only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)S210.N only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)S210.N only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)S210.N only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)S210.N only 0.000 apart, marking (T0298)E207.N as missing WARNING: atoms too close: (T0298)A206.C and (T0298)S210.N only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)S210.N only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)S210.N only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)S210.N only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)S210.N only 0.000 apart, marking (T0298)A206.N as missing WARNING: atoms too close: (T0298)D205.C and (T0298)S210.N only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)S210.N only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)S210.N only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)S210.N only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)S210.N only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)S210.N only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)S210.N only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)S210.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)V204.C and (T0298)S210.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)S210.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)S210.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)S210.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)S210.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)S210.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)S210.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)S210.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)S210.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)S210.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)S210.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)S210.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)S210.N only 0.000 apart, marking (T0298)S210.N as missing WARNING: atoms too close: (T0298)S210.N and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.C and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.O and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)H209.N and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)G208.C and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)G208.O and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.C and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.O and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A206.C and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A206.O and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)D205.C and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)D205.O and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)S210.CA only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)S210.N and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.C and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.O and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)H209.N and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)G208.C and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)G208.O and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)G208.N and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.C and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.O and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)E207.N and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A206.C and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A206.O and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A206.N and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)D205.C and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)D205.O and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)D205.N and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)V204.C and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)V204.O and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)S210.CB only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)S210.N and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.C and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.O and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)H209.N and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)G208.C and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)G208.O and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)G208.N and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.C and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.O and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)E207.N and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A206.C and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A206.O and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A206.N and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)D205.C and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)D205.O and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)D205.N and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)V204.C and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)V204.O and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)V204.N and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A203.C and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A203.O and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)A203.N and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)G202.C and (T0298)S210.OG only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)S210.N and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.C and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.O and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)H209.N and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)G208.C and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)G208.O and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)G208.N and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.C and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.O and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)E207.N and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A206.C and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A206.O and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A206.N and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)D205.C and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)S210.O only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)S210.O and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)S210.N and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.C and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.O and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)H209.N and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)G208.C and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)G208.N and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.C and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)E207.N and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A206.C and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A206.N and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)S210.C only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)S210.C and (T0298)A211.N only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)S210.O and (T0298)A211.N only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)A211.N only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)A211.N only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)A211.N only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)S210.N and (T0298)A211.N only 0.000 apart, marking (T0298)S210.N as missing WARNING: atoms too close: (T0298)H209.C and (T0298)A211.N only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.O and (T0298)A211.N only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)A211.N only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)A211.N only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)A211.N only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)A211.N only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)A211.N only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)A211.N only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)A211.N only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)H209.N and (T0298)A211.N only 0.000 apart, marking (T0298)H209.N as missing WARNING: atoms too close: (T0298)G208.C and (T0298)A211.N only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)A211.N only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)A211.N only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)A211.N only 0.000 apart, marking (T0298)G208.N as missing WARNING: atoms too close: (T0298)E207.C and (T0298)A211.N only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)A211.N only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)A211.N only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)A211.N only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)A211.N only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)A211.N only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)A211.N only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)A211.N only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)A211.N only 0.000 apart, marking (T0298)E207.N as missing WARNING: atoms too close: (T0298)A206.C and (T0298)A211.N only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)A211.N only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)A211.N only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)A211.N only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A211.N only 0.000 apart, marking (T0298)A206.N as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A211.N only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A211.N only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A211.N only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A211.N only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A211.N only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A211.N only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A211.N only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A211.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A211.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A211.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A211.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A211.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A211.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A211.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A211.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A211.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A211.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A211.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A211.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A211.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A211.N only 0.000 apart, marking (T0298)A211.N as missing WARNING: atoms too close: (T0298)A211.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)S210.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)S210.O and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)S210.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.O and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)H209.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)G208.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)G208.O and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.O and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A206.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A206.O and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A211.CA only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A211.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)S210.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)S210.O and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)S210.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.O and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)H209.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)G208.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)G208.O and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)G208.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.O and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)E207.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A206.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A206.O and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A211.CB only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A211.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)S210.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)S210.O and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)S210.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.O and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)H209.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)G208.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)G208.O and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)G208.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.O and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)E207.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A206.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A206.O and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A211.O only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A211.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A211.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)S210.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)S210.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)S210.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)H209.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)G208.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)G208.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)E207.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A206.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A206.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)A211.C only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A211.C and (T0298)I212.N only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A211.O and (T0298)I212.N only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)I212.N only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)I212.N only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A211.N and (T0298)I212.N only 0.000 apart, marking (T0298)A211.N as missing WARNING: atoms too close: (T0298)S210.C and (T0298)I212.N only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)S210.O and (T0298)I212.N only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)I212.N only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)I212.N only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)I212.N only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)S210.N and (T0298)I212.N only 0.000 apart, marking (T0298)S210.N as missing WARNING: atoms too close: (T0298)H209.C and (T0298)I212.N only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.O and (T0298)I212.N only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)I212.N only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)I212.N only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)I212.N only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)I212.N only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)I212.N only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)I212.N only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)I212.N only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)H209.N and (T0298)I212.N only 0.000 apart, marking (T0298)H209.N as missing WARNING: atoms too close: (T0298)G208.C and (T0298)I212.N only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)I212.N only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)I212.N only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)I212.N only 0.000 apart, marking (T0298)G208.N as missing WARNING: atoms too close: (T0298)E207.C and (T0298)I212.N only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)I212.N only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)I212.N only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)I212.N only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)I212.N only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)I212.N only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)I212.N only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)I212.N only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)I212.N only 0.000 apart, marking (T0298)E207.N as missing WARNING: atoms too close: (T0298)A206.C and (T0298)I212.N only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)I212.N only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)I212.N only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)I212.N only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)I212.N only 0.000 apart, marking (T0298)A206.N as missing WARNING: atoms too close: (T0298)D205.C and (T0298)I212.N only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)I212.N only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)I212.N only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)I212.N only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)I212.N only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)I212.N only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)I212.N only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)I212.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)V204.C and (T0298)I212.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)I212.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)I212.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)I212.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)I212.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)I212.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)I212.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)I212.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)I212.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)I212.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)I212.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)I212.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)I212.N only 0.000 apart, marking (T0298)I212.N as missing WARNING: atoms too close: (T0298)I212.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A211.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A211.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A211.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)S210.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)S210.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)S210.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)H209.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)G208.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)G208.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A206.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A206.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)D205.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)D205.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)I212.CA only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)I212.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A211.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A211.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A211.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)S210.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)S210.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)S210.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)H209.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)G208.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)G208.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)G208.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)E207.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A206.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A206.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A206.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)D205.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)D205.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)D205.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)V204.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)V204.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)I212.CB only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)I212.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A211.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A211.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A211.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)S210.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)S210.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)S210.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)I212.CG1 only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)I212.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A211.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A211.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A211.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)S210.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)S210.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)S210.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)I212.CG2 only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)I212.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A211.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A211.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A211.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)S210.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)S210.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)S210.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)I212.CD1 only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)I212.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A211.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A211.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A211.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)S210.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)S210.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)S210.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)H209.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)G208.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)G208.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)G208.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)E207.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A206.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A206.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A206.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)D205.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)I212.O only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)I212.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)I212.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A211.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A211.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A211.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)S210.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)S210.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)S210.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)H209.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)G208.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)G208.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)E207.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A206.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A206.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)I212.C only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.N only 0.000 apart, marking (T0298)I212.C as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.N only 0.000 apart, marking (T0298)I212.O as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.N only 0.000 apart, marking (T0298)I212.CD1 as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.N only 0.000 apart, marking (T0298)I212.CG2 as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.N only 0.000 apart, marking (T0298)I212.CG1 as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.N only 0.000 apart, marking (T0298)I212.CB as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.N only 0.000 apart, marking (T0298)I212.CA as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.N only 0.000 apart, marking (T0298)I212.N as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.N only 0.000 apart, marking (T0298)A211.C as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.N only 0.000 apart, marking (T0298)A211.O as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.N only 0.000 apart, marking (T0298)A211.CB as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.N only 0.000 apart, marking (T0298)A211.CA as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.N only 0.000 apart, marking (T0298)A211.N as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.N only 0.000 apart, marking (T0298)S210.C as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.N only 0.000 apart, marking (T0298)S210.O as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.N only 0.000 apart, marking (T0298)S210.OG as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.N only 0.000 apart, marking (T0298)S210.CB as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.N only 0.000 apart, marking (T0298)S210.CA as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.N only 0.000 apart, marking (T0298)S210.N as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.N only 0.000 apart, marking (T0298)H209.C as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.N only 0.000 apart, marking (T0298)H209.O as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.N only 0.000 apart, marking (T0298)H209.NE2 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.N only 0.000 apart, marking (T0298)H209.CE1 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.N only 0.000 apart, marking (T0298)H209.ND1 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.N only 0.000 apart, marking (T0298)H209.CD2 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.N only 0.000 apart, marking (T0298)H209.CG as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.N only 0.000 apart, marking (T0298)H209.CB as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.N only 0.000 apart, marking (T0298)H209.CA as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.N only 0.000 apart, marking (T0298)H209.N as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.N only 0.000 apart, marking (T0298)G208.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.N only 0.000 apart, marking (T0298)G208.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.N only 0.000 apart, marking (T0298)G208.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.N only 0.000 apart, marking (T0298)G208.N as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.N only 0.000 apart, marking (T0298)E207.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.N only 0.000 apart, marking (T0298)E207.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.N only 0.000 apart, marking (T0298)E207.OE2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.N only 0.000 apart, marking (T0298)E207.OE1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.N only 0.000 apart, marking (T0298)E207.CD as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.N only 0.000 apart, marking (T0298)E207.CG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.N only 0.000 apart, marking (T0298)E207.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.N only 0.000 apart, marking (T0298)E207.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.N only 0.000 apart, marking (T0298)E207.N as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.N only 0.000 apart, marking (T0298)A206.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.N only 0.000 apart, marking (T0298)A206.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.N only 0.000 apart, marking (T0298)A206.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.N only 0.000 apart, marking (T0298)A206.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.N only 0.000 apart, marking (T0298)A206.N as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.N only 0.000 apart, marking (T0298)D205.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.N only 0.000 apart, marking (T0298)D205.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.N only 0.000 apart, marking (T0298)D205.OD2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.N only 0.000 apart, marking (T0298)D205.OD1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.N only 0.000 apart, marking (T0298)D205.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.N only 0.000 apart, marking (T0298)D205.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.N only 0.000 apart, marking (T0298)D205.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.N only 0.000 apart, marking (T0298)D205.N as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.N only 0.000 apart, marking (T0298)V204.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.N only 0.000 apart, marking (T0298)V204.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.N only 0.000 apart, marking (T0298)V204.CG2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.N only 0.000 apart, marking (T0298)V204.CG1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.N only 0.000 apart, marking (T0298)V204.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.N only 0.000 apart, marking (T0298)V204.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.N only 0.000 apart, marking (T0298)V204.N as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.N only 0.000 apart, marking (T0298)A203.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.N only 0.000 apart, marking (T0298)A203.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.N only 0.000 apart, marking (T0298)A203.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.N only 0.000 apart, marking (T0298)A203.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.N only 0.000 apart, marking (T0298)A203.N as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.N only 0.000 apart, marking (T0298)E213.N as missing WARNING: atoms too close: (T0298)E213.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.CA only 0.000 apart, marking (T0298)E213.CA as missing WARNING: atoms too close: (T0298)E213.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E213.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.CB only 0.000 apart, marking (T0298)E213.CB as missing WARNING: atoms too close: (T0298)E213.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E213.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E213.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.CG only 0.000 apart, marking (T0298)E213.CG as missing WARNING: atoms too close: (T0298)E213.CG and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E213.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E213.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E213.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.CD only 0.000 apart, marking (T0298)E213.CD as missing WARNING: atoms too close: (T0298)E213.CD and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E213.CG and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E213.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E213.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E213.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.OE1 only 0.000 apart, marking (T0298)E213.OE1 as missing WARNING: atoms too close: (T0298)E213.OE1 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E213.CD and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E213.CG and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E213.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E213.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E213.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.OE2 only 0.000 apart, marking (T0298)E213.OE2 as missing WARNING: atoms too close: (T0298)E213.OE2 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E213.OE1 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E213.CD and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E213.CG and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E213.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E213.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E213.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.O only 0.000 apart, marking (T0298)E213.O as missing WARNING: atoms too close: (T0298)E213.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E213.OE2 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E213.OE1 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E213.CD and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E213.CG and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E213.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E213.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E213.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)I212.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)I212.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)I212.CD1 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)I212.CG2 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)I212.CG1 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)I212.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)I212.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)I212.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A211.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A211.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A211.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A211.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A211.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)S210.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)S210.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)S210.OG and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)S210.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)S210.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)S210.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.NE2 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.CE1 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.ND1 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.CD2 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.CG and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)H209.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)G208.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)G208.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)G208.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)G208.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.OE2 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.OE1 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.CD and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.CG and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)E207.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A206.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A206.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A206.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A206.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A206.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)D205.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)D205.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)D205.OD2 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)D205.OD1 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)D205.CG and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)D205.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)D205.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)D205.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)V204.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)V204.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)V204.CG2 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)V204.CG1 and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)V204.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)V204.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)V204.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A203.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A203.O and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A203.CB and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A203.CA and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)A203.N and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing WARNING: atoms too close: (T0298)G202.C and (T0298)E213.C only 0.000 apart, marking (T0298)E213.C as missing # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_636453922.pdb -s /var/tmp/to_scwrl_636453922.seq -o /var/tmp/from_scwrl_636453922.pdb > /var/tmp/scwrl_636453922.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_636453922.pdb # conformation set from SCWRL output # naming current conformation CaspIta-FOX_TS2-scwrl # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_275847635.pdb -s /var/tmp/to_scwrl_275847635.seq -o /var/tmp/from_scwrl_275847635.pdb > /var/tmp/scwrl_275847635.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_275847635.pdb # conformation set from SCWRL output # naming current conformation CaspIta-FOX_TS3-scwrl # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1801483606.pdb -s /var/tmp/to_scwrl_1801483606.seq -o /var/tmp/from_scwrl_1801483606.pdb > /var/tmp/scwrl_1801483606.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1801483606.pdb # conformation set from SCWRL output # naming current conformation CaspIta-FOX_TS4-scwrl # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1021003329.pdb -s /var/tmp/to_scwrl_1021003329.seq -o /var/tmp/from_scwrl_1021003329.pdb > /var/tmp/scwrl_1021003329.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1021003329.pdb # conformation set from SCWRL output # naming current conformation CaspIta-FOX_TS5-scwrl # ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Distill_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1618167446.pdb -s /var/tmp/to_scwrl_1618167446.seq -o /var/tmp/from_scwrl_1618167446.pdb > /var/tmp/scwrl_1618167446.log Error: Couldn't open file /var/tmp/from_scwrl_1618167446.pdb or /var/tmp/from_scwrl_1618167446.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_1618167446_b.pdb or decoys//var/tmp/from_scwrl_1618167446_b.pdb.gz for input Trying /var/tmp/from_scwrl_1618167446_b.pdb Error: Couldn't open file /var/tmp/from_scwrl_1618167446_b.pdb or /var/tmp/from_scwrl_1618167446_b.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_1618167446_a.pdb or decoys//var/tmp/from_scwrl_1618167446_a.pdb.gz for input Trying /var/tmp/from_scwrl_1618167446_a.pdb Error: Couldn't open file /var/tmp/from_scwrl_1618167446_a.pdb or /var/tmp/from_scwrl_1618167446_a.pdb.gz for input Error: can't open any of /var/tmp/from_scwrl_1618167446.pdb or /var/tmp/from_scwrl_1618167446_b.pdb or /var/tmp/from_scwrl_1618167446_a.pdb Error: no new SCWRL conformation added # naming current conformation Distill_TS1-scwrl # ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Distill_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1188959122.pdb -s /var/tmp/to_scwrl_1188959122.seq -o /var/tmp/from_scwrl_1188959122.pdb > /var/tmp/scwrl_1188959122.log Error: Couldn't open file /var/tmp/from_scwrl_1188959122.pdb or /var/tmp/from_scwrl_1188959122.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_1188959122_b.pdb or decoys//var/tmp/from_scwrl_1188959122_b.pdb.gz for input Trying /var/tmp/from_scwrl_1188959122_b.pdb Error: Couldn't open file /var/tmp/from_scwrl_1188959122_b.pdb or /var/tmp/from_scwrl_1188959122_b.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_1188959122_a.pdb or decoys//var/tmp/from_scwrl_1188959122_a.pdb.gz for input Trying /var/tmp/from_scwrl_1188959122_a.pdb Error: Couldn't open file /var/tmp/from_scwrl_1188959122_a.pdb or /var/tmp/from_scwrl_1188959122_a.pdb.gz for input Error: can't open any of /var/tmp/from_scwrl_1188959122.pdb or /var/tmp/from_scwrl_1188959122_b.pdb or /var/tmp/from_scwrl_1188959122_a.pdb Error: no new SCWRL conformation added # naming current conformation Distill_TS2-scwrl # ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Distill_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1121378510.pdb -s /var/tmp/to_scwrl_1121378510.seq -o /var/tmp/from_scwrl_1121378510.pdb > /var/tmp/scwrl_1121378510.log Error: Couldn't open file /var/tmp/from_scwrl_1121378510.pdb or /var/tmp/from_scwrl_1121378510.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_1121378510_b.pdb or decoys//var/tmp/from_scwrl_1121378510_b.pdb.gz for input Trying /var/tmp/from_scwrl_1121378510_b.pdb Error: Couldn't open file /var/tmp/from_scwrl_1121378510_b.pdb or /var/tmp/from_scwrl_1121378510_b.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_1121378510_a.pdb or decoys//var/tmp/from_scwrl_1121378510_a.pdb.gz for input Trying /var/tmp/from_scwrl_1121378510_a.pdb Error: Couldn't open file /var/tmp/from_scwrl_1121378510_a.pdb or /var/tmp/from_scwrl_1121378510_a.pdb.gz for input Error: can't open any of /var/tmp/from_scwrl_1121378510.pdb or /var/tmp/from_scwrl_1121378510_b.pdb or /var/tmp/from_scwrl_1121378510_a.pdb Error: no new SCWRL conformation added # naming current conformation Distill_TS3-scwrl # ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Distill_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1869860350.pdb -s /var/tmp/to_scwrl_1869860350.seq -o /var/tmp/from_scwrl_1869860350.pdb > /var/tmp/scwrl_1869860350.log Error: Couldn't open file /var/tmp/from_scwrl_1869860350.pdb or /var/tmp/from_scwrl_1869860350.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_1869860350_b.pdb or decoys//var/tmp/from_scwrl_1869860350_b.pdb.gz for input Trying /var/tmp/from_scwrl_1869860350_b.pdb Error: Couldn't open file /var/tmp/from_scwrl_1869860350_b.pdb or /var/tmp/from_scwrl_1869860350_b.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_1869860350_a.pdb or decoys//var/tmp/from_scwrl_1869860350_a.pdb.gz for input Trying /var/tmp/from_scwrl_1869860350_a.pdb Error: Couldn't open file /var/tmp/from_scwrl_1869860350_a.pdb or /var/tmp/from_scwrl_1869860350_a.pdb.gz for input Error: can't open any of /var/tmp/from_scwrl_1869860350.pdb or /var/tmp/from_scwrl_1869860350_b.pdb or /var/tmp/from_scwrl_1869860350_a.pdb Error: no new SCWRL conformation added # naming current conformation Distill_TS4-scwrl # ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Distill_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_669081066.pdb -s /var/tmp/to_scwrl_669081066.seq -o /var/tmp/from_scwrl_669081066.pdb > /var/tmp/scwrl_669081066.log Error: Couldn't open file /var/tmp/from_scwrl_669081066.pdb or /var/tmp/from_scwrl_669081066.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_669081066_b.pdb or decoys//var/tmp/from_scwrl_669081066_b.pdb.gz for input Trying /var/tmp/from_scwrl_669081066_b.pdb Error: Couldn't open file /var/tmp/from_scwrl_669081066_b.pdb or /var/tmp/from_scwrl_669081066_b.pdb.gz for input Warning: Couldn't open file decoys//var/tmp/from_scwrl_669081066_a.pdb or decoys//var/tmp/from_scwrl_669081066_a.pdb.gz for input Trying /var/tmp/from_scwrl_669081066_a.pdb Error: Couldn't open file /var/tmp/from_scwrl_669081066_a.pdb or /var/tmp/from_scwrl_669081066_a.pdb.gz for input Error: can't open any of /var/tmp/from_scwrl_669081066.pdb or /var/tmp/from_scwrl_669081066_b.pdb or /var/tmp/from_scwrl_669081066_a.pdb Error: no new SCWRL conformation added # naming current conformation Distill_TS5-scwrl # ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation FAMSD_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1893787612.pdb -s /var/tmp/to_scwrl_1893787612.seq -o /var/tmp/from_scwrl_1893787612.pdb > /var/tmp/scwrl_1893787612.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1893787612.pdb # conformation set from SCWRL output # naming current conformation FAMSD_TS1-scwrl # ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FAMSD_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2015294362.pdb -s /var/tmp/to_scwrl_2015294362.seq -o /var/tmp/from_scwrl_2015294362.pdb > /var/tmp/scwrl_2015294362.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2015294362.pdb # conformation set from SCWRL output # naming current conformation FAMSD_TS2-scwrl # ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FAMSD_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_96895980.pdb -s /var/tmp/to_scwrl_96895980.seq -o /var/tmp/from_scwrl_96895980.pdb > /var/tmp/scwrl_96895980.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_96895980.pdb # conformation set from SCWRL output # naming current conformation FAMSD_TS3-scwrl # ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FAMSD_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1724747977.pdb -s /var/tmp/to_scwrl_1724747977.seq -o /var/tmp/from_scwrl_1724747977.pdb > /var/tmp/scwrl_1724747977.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1724747977.pdb # conformation set from SCWRL output # naming current conformation FAMSD_TS4-scwrl # ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FAMSD_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_404111425.pdb -s /var/tmp/to_scwrl_404111425.seq -o /var/tmp/from_scwrl_404111425.pdb > /var/tmp/scwrl_404111425.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_404111425.pdb # conformation set from SCWRL output # naming current conformation FAMSD_TS5-scwrl # ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation FAMS_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1198307311.pdb -s /var/tmp/to_scwrl_1198307311.seq -o /var/tmp/from_scwrl_1198307311.pdb > /var/tmp/scwrl_1198307311.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1198307311.pdb # conformation set from SCWRL output # naming current conformation FAMS_TS1-scwrl # ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FAMS_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1592374445.pdb -s /var/tmp/to_scwrl_1592374445.seq -o /var/tmp/from_scwrl_1592374445.pdb > /var/tmp/scwrl_1592374445.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1592374445.pdb # conformation set from SCWRL output # naming current conformation FAMS_TS2-scwrl # ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation FAMS_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1871536134.pdb -s /var/tmp/to_scwrl_1871536134.seq -o /var/tmp/from_scwrl_1871536134.pdb > /var/tmp/scwrl_1871536134.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1871536134.pdb # conformation set from SCWRL output # naming current conformation FAMS_TS3-scwrl # ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FAMS_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1301545154.pdb -s /var/tmp/to_scwrl_1301545154.seq -o /var/tmp/from_scwrl_1301545154.pdb > /var/tmp/scwrl_1301545154.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1301545154.pdb # conformation set from SCWRL output # naming current conformation FAMS_TS4-scwrl # ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1 # Found a chain break before 328 # copying to AlignedFragments data structure # naming current conformation FAMS_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2023091224.pdb -s /var/tmp/to_scwrl_2023091224.seq -o /var/tmp/from_scwrl_2023091224.pdb > /var/tmp/scwrl_2023091224.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2023091224.pdb # conformation set from SCWRL output # naming current conformation FAMS_TS5-scwrl # ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_877809610.pdb -s /var/tmp/to_scwrl_877809610.seq -o /var/tmp/from_scwrl_877809610.pdb > /var/tmp/scwrl_877809610.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_877809610.pdb # conformation set from SCWRL output # naming current conformation FOLDpro_TS1-scwrl # ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1 # Found a chain break before 329 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_829122690.pdb -s /var/tmp/to_scwrl_829122690.seq -o /var/tmp/from_scwrl_829122690.pdb > /var/tmp/scwrl_829122690.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_829122690.pdb # conformation set from SCWRL output # naming current conformation FOLDpro_TS2-scwrl # ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1 # Found a chain break before 330 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_577280450.pdb -s /var/tmp/to_scwrl_577280450.seq -o /var/tmp/from_scwrl_577280450.pdb > /var/tmp/scwrl_577280450.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_577280450.pdb # conformation set from SCWRL output # naming current conformation FOLDpro_TS3-scwrl # ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1 # Found a chain break before 254 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2055398476.pdb -s /var/tmp/to_scwrl_2055398476.seq -o /var/tmp/from_scwrl_2055398476.pdb > /var/tmp/scwrl_2055398476.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2055398476.pdb # conformation set from SCWRL output # naming current conformation FOLDpro_TS4-scwrl # ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1 # Found a chain break before 289 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_981496824.pdb -s /var/tmp/to_scwrl_981496824.seq -o /var/tmp/from_scwrl_981496824.pdb > /var/tmp/scwrl_981496824.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_981496824.pdb # conformation set from SCWRL output # naming current conformation FOLDpro_TS5-scwrl # ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE1_AL1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1055114908.pdb -s /var/tmp/to_scwrl_1055114908.seq -o /var/tmp/from_scwrl_1055114908.pdb > /var/tmp/scwrl_1055114908.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1055114908.pdb # conformation set from SCWRL output # naming current conformation FORTE1_AL1-scwrl # ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE1_AL2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_334601018.pdb -s /var/tmp/to_scwrl_334601018.seq -o /var/tmp/from_scwrl_334601018.pdb > /var/tmp/scwrl_334601018.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_334601018.pdb # conformation set from SCWRL output # naming current conformation FORTE1_AL2-scwrl # ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE1_AL3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1497952488.pdb -s /var/tmp/to_scwrl_1497952488.seq -o /var/tmp/from_scwrl_1497952488.pdb > /var/tmp/scwrl_1497952488.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1497952488.pdb # conformation set from SCWRL output # naming current conformation FORTE1_AL3-scwrl # ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE1_AL4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1955493880.pdb -s /var/tmp/to_scwrl_1955493880.seq -o /var/tmp/from_scwrl_1955493880.pdb > /var/tmp/scwrl_1955493880.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1955493880.pdb # conformation set from SCWRL output # naming current conformation FORTE1_AL4-scwrl # ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1 Skipped atom 748, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz Skipped atom 750, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE1_AL5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1630480212.pdb -s /var/tmp/to_scwrl_1630480212.seq -o /var/tmp/from_scwrl_1630480212.pdb > /var/tmp/scwrl_1630480212.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1630480212.pdb # conformation set from SCWRL output # naming current conformation FORTE1_AL5-scwrl # ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE2_AL1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1299027715.pdb -s /var/tmp/to_scwrl_1299027715.seq -o /var/tmp/from_scwrl_1299027715.pdb > /var/tmp/scwrl_1299027715.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1299027715.pdb # conformation set from SCWRL output # naming current conformation FORTE2_AL1-scwrl # ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE2_AL2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2137877680.pdb -s /var/tmp/to_scwrl_2137877680.seq -o /var/tmp/from_scwrl_2137877680.pdb > /var/tmp/scwrl_2137877680.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2137877680.pdb # conformation set from SCWRL output # naming current conformation FORTE2_AL2-scwrl # ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE2_AL3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_119450487.pdb -s /var/tmp/to_scwrl_119450487.seq -o /var/tmp/from_scwrl_119450487.pdb > /var/tmp/scwrl_119450487.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_119450487.pdb # conformation set from SCWRL output # naming current conformation FORTE2_AL3-scwrl # ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE2_AL4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1574875351.pdb -s /var/tmp/to_scwrl_1574875351.seq -o /var/tmp/from_scwrl_1574875351.pdb > /var/tmp/scwrl_1574875351.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1574875351.pdb # conformation set from SCWRL output # naming current conformation FORTE2_AL4-scwrl # ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1 Skipped atom 748, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL5.pdb.gz Skipped atom 750, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL5.pdb.gz # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FORTE2_AL5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1791877640.pdb -s /var/tmp/to_scwrl_1791877640.seq -o /var/tmp/from_scwrl_1791877640.pdb > /var/tmp/scwrl_1791877640.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1791877640.pdb # conformation set from SCWRL output # naming current conformation FORTE2_AL5-scwrl # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS1.pdb.gz looking for model 1 # Found a chain break before 332 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1140453815.pdb -s /var/tmp/to_scwrl_1140453815.seq -o /var/tmp/from_scwrl_1140453815.pdb > /var/tmp/scwrl_1140453815.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1140453815.pdb # conformation set from SCWRL output # naming current conformation FPSOLVER-SERVER_TS1-scwrl # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS2.pdb.gz looking for model 1 # Found a chain break before 329 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1045559151.pdb -s /var/tmp/to_scwrl_1045559151.seq -o /var/tmp/from_scwrl_1045559151.pdb > /var/tmp/scwrl_1045559151.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1045559151.pdb # conformation set from SCWRL output # naming current conformation FPSOLVER-SERVER_TS2-scwrl # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS3.pdb.gz looking for model 1 # Found a chain break before 325 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_833353116.pdb -s /var/tmp/to_scwrl_833353116.seq -o /var/tmp/from_scwrl_833353116.pdb > /var/tmp/scwrl_833353116.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_833353116.pdb # conformation set from SCWRL output # naming current conformation FPSOLVER-SERVER_TS3-scwrl # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS4.pdb.gz looking for model 1 # Found a chain break before 331 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_114348680.pdb -s /var/tmp/to_scwrl_114348680.seq -o /var/tmp/from_scwrl_114348680.pdb > /var/tmp/scwrl_114348680.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_114348680.pdb # conformation set from SCWRL output # naming current conformation FPSOLVER-SERVER_TS4-scwrl # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS5.pdb.gz looking for model 1 # Found a chain break before 329 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_767935854.pdb -s /var/tmp/to_scwrl_767935854.seq -o /var/tmp/from_scwrl_767935854.pdb > /var/tmp/scwrl_767935854.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_767935854.pdb # conformation set from SCWRL output # naming current conformation FPSOLVER-SERVER_TS5-scwrl # ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1502434181.pdb -s /var/tmp/to_scwrl_1502434181.seq -o /var/tmp/from_scwrl_1502434181.pdb > /var/tmp/scwrl_1502434181.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1502434181.pdb # conformation set from SCWRL output # naming current conformation FUGMOD_TS1-scwrl # ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2008136292.pdb -s /var/tmp/to_scwrl_2008136292.seq -o /var/tmp/from_scwrl_2008136292.pdb > /var/tmp/scwrl_2008136292.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2008136292.pdb # conformation set from SCWRL output # naming current conformation FUGMOD_TS2-scwrl # ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_635746569.pdb -s /var/tmp/to_scwrl_635746569.seq -o /var/tmp/from_scwrl_635746569.pdb > /var/tmp/scwrl_635746569.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_635746569.pdb # conformation set from SCWRL output # naming current conformation FUGMOD_TS3-scwrl # ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1599330161.pdb -s /var/tmp/to_scwrl_1599330161.seq -o /var/tmp/from_scwrl_1599330161.pdb > /var/tmp/scwrl_1599330161.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1599330161.pdb # conformation set from SCWRL output # naming current conformation FUGMOD_TS4-scwrl # ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1585400623.pdb -s /var/tmp/to_scwrl_1585400623.seq -o /var/tmp/from_scwrl_1585400623.pdb > /var/tmp/scwrl_1585400623.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1585400623.pdb # conformation set from SCWRL output # naming current conformation FUGMOD_TS5-scwrl # ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGUE_AL1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1039857994.pdb -s /var/tmp/to_scwrl_1039857994.seq -o /var/tmp/from_scwrl_1039857994.pdb > /var/tmp/scwrl_1039857994.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1039857994.pdb # conformation set from SCWRL output # naming current conformation FUGUE_AL1-scwrl # ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGUE_AL2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_650153826.pdb -s /var/tmp/to_scwrl_650153826.seq -o /var/tmp/from_scwrl_650153826.pdb > /var/tmp/scwrl_650153826.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_650153826.pdb # conformation set from SCWRL output # naming current conformation FUGUE_AL2-scwrl # ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGUE_AL3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1030291422.pdb -s /var/tmp/to_scwrl_1030291422.seq -o /var/tmp/from_scwrl_1030291422.pdb > /var/tmp/scwrl_1030291422.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1030291422.pdb # conformation set from SCWRL output # naming current conformation FUGUE_AL3-scwrl # ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGUE_AL4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_763910481.pdb -s /var/tmp/to_scwrl_763910481.seq -o /var/tmp/from_scwrl_763910481.pdb > /var/tmp/scwrl_763910481.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_763910481.pdb # conformation set from SCWRL output # naming current conformation FUGUE_AL4-scwrl # ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation FUGUE_AL5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1951698980.pdb -s /var/tmp/to_scwrl_1951698980.seq -o /var/tmp/from_scwrl_1951698980.pdb > /var/tmp/scwrl_1951698980.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1951698980.pdb # conformation set from SCWRL output # naming current conformation FUGUE_AL5-scwrl # ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_905899000.pdb -s /var/tmp/to_scwrl_905899000.seq -o /var/tmp/from_scwrl_905899000.pdb > /var/tmp/scwrl_905899000.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_905899000.pdb # conformation set from SCWRL output # naming current conformation FUNCTION_TS1-scwrl # ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1 # Found a chain break before 334 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1641720090.pdb -s /var/tmp/to_scwrl_1641720090.seq -o /var/tmp/from_scwrl_1641720090.pdb > /var/tmp/scwrl_1641720090.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1641720090.pdb # conformation set from SCWRL output # naming current conformation FUNCTION_TS2-scwrl # ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_633338024.pdb -s /var/tmp/to_scwrl_633338024.seq -o /var/tmp/from_scwrl_633338024.pdb > /var/tmp/scwrl_633338024.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_633338024.pdb # conformation set from SCWRL output # naming current conformation FUNCTION_TS3-scwrl # ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1 # Found a chain break before 334 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1483179449.pdb -s /var/tmp/to_scwrl_1483179449.seq -o /var/tmp/from_scwrl_1483179449.pdb > /var/tmp/scwrl_1483179449.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1483179449.pdb # conformation set from SCWRL output # naming current conformation FUNCTION_TS4-scwrl # ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1 # Found a chain break before 334 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1549634920.pdb -s /var/tmp/to_scwrl_1549634920.seq -o /var/tmp/from_scwrl_1549634920.pdb > /var/tmp/scwrl_1549634920.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1549634920.pdb # conformation set from SCWRL output # naming current conformation FUNCTION_TS5-scwrl # ReadConformPDB reading from PDB file servers/Frankenstein_TS5.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation Frankenstein_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1614834847.pdb -s /var/tmp/to_scwrl_1614834847.seq -o /var/tmp/from_scwrl_1614834847.pdb > /var/tmp/scwrl_1614834847.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1614834847.pdb # conformation set from SCWRL output # naming current conformation Frankenstein_TS5-scwrl # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation GeneSilicoMetaServer_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_390810710.pdb -s /var/tmp/to_scwrl_390810710.seq -o /var/tmp/from_scwrl_390810710.pdb > /var/tmp/scwrl_390810710.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_390810710.pdb # conformation set from SCWRL output # naming current conformation GeneSilicoMetaServer_TS1-scwrl # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation GeneSilicoMetaServer_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1884235938.pdb -s /var/tmp/to_scwrl_1884235938.seq -o /var/tmp/from_scwrl_1884235938.pdb > /var/tmp/scwrl_1884235938.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1884235938.pdb # conformation set from SCWRL output # naming current conformation GeneSilicoMetaServer_TS2-scwrl # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation GeneSilicoMetaServer_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_965303689.pdb -s /var/tmp/to_scwrl_965303689.seq -o /var/tmp/from_scwrl_965303689.pdb > /var/tmp/scwrl_965303689.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_965303689.pdb # conformation set from SCWRL output # naming current conformation GeneSilicoMetaServer_TS3-scwrl # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation GeneSilicoMetaServer_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_198820943.pdb -s /var/tmp/to_scwrl_198820943.seq -o /var/tmp/from_scwrl_198820943.pdb > /var/tmp/scwrl_198820943.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_198820943.pdb # conformation set from SCWRL output # naming current conformation GeneSilicoMetaServer_TS4-scwrl # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation GeneSilicoMetaServer_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1367232504.pdb -s /var/tmp/to_scwrl_1367232504.seq -o /var/tmp/from_scwrl_1367232504.pdb > /var/tmp/scwrl_1367232504.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1367232504.pdb # conformation set from SCWRL output # naming current conformation GeneSilicoMetaServer_TS5-scwrl # ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1 # Found a chain break before 332 # copying to AlignedFragments data structure # naming current conformation HHpred1_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_116847757.pdb -s /var/tmp/to_scwrl_116847757.seq -o /var/tmp/from_scwrl_116847757.pdb > /var/tmp/scwrl_116847757.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_116847757.pdb # conformation set from SCWRL output # naming current conformation HHpred1_TS1-scwrl # ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation HHpred2_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_189214977.pdb -s /var/tmp/to_scwrl_189214977.seq -o /var/tmp/from_scwrl_189214977.pdb > /var/tmp/scwrl_189214977.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_189214977.pdb # conformation set from SCWRL output # naming current conformation HHpred2_TS1-scwrl # ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation HHpred3_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1486682991.pdb -s /var/tmp/to_scwrl_1486682991.seq -o /var/tmp/from_scwrl_1486682991.pdb > /var/tmp/scwrl_1486682991.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1486682991.pdb # conformation set from SCWRL output # naming current conformation HHpred3_TS1-scwrl # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1691723108.pdb -s /var/tmp/to_scwrl_1691723108.seq -o /var/tmp/from_scwrl_1691723108.pdb > /var/tmp/scwrl_1691723108.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1691723108.pdb # conformation set from SCWRL output # naming current conformation Huber-Torda-Server_TS1-scwrl # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1981092617.pdb -s /var/tmp/to_scwrl_1981092617.seq -o /var/tmp/from_scwrl_1981092617.pdb > /var/tmp/scwrl_1981092617.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1981092617.pdb # conformation set from SCWRL output # naming current conformation Huber-Torda-Server_TS2-scwrl # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_479653161.pdb -s /var/tmp/to_scwrl_479653161.seq -o /var/tmp/from_scwrl_479653161.pdb > /var/tmp/scwrl_479653161.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_479653161.pdb # conformation set from SCWRL output # naming current conformation Huber-Torda-Server_TS3-scwrl # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_589798612.pdb -s /var/tmp/to_scwrl_589798612.seq -o /var/tmp/from_scwrl_589798612.pdb > /var/tmp/scwrl_589798612.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_589798612.pdb # conformation set from SCWRL output # naming current conformation Huber-Torda-Server_TS4-scwrl # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_666962086.pdb -s /var/tmp/to_scwrl_666962086.seq -o /var/tmp/from_scwrl_666962086.pdb > /var/tmp/scwrl_666962086.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_666962086.pdb # conformation set from SCWRL output # naming current conformation Huber-Torda-Server_TS5-scwrl # ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation LOOPP_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_594001841.pdb -s /var/tmp/to_scwrl_594001841.seq -o /var/tmp/from_scwrl_594001841.pdb > /var/tmp/scwrl_594001841.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_594001841.pdb # conformation set from SCWRL output # naming current conformation LOOPP_TS1-scwrl # ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation LOOPP_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1357734465.pdb -s /var/tmp/to_scwrl_1357734465.seq -o /var/tmp/from_scwrl_1357734465.pdb > /var/tmp/scwrl_1357734465.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1357734465.pdb # conformation set from SCWRL output # naming current conformation LOOPP_TS2-scwrl # ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation LOOPP_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_21912620.pdb -s /var/tmp/to_scwrl_21912620.seq -o /var/tmp/from_scwrl_21912620.pdb > /var/tmp/scwrl_21912620.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_21912620.pdb # conformation set from SCWRL output # naming current conformation LOOPP_TS3-scwrl # ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation LOOPP_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_454654486.pdb -s /var/tmp/to_scwrl_454654486.seq -o /var/tmp/from_scwrl_454654486.pdb > /var/tmp/scwrl_454654486.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_454654486.pdb # conformation set from SCWRL output # naming current conformation LOOPP_TS4-scwrl # ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation LOOPP_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1993481034.pdb -s /var/tmp/to_scwrl_1993481034.seq -o /var/tmp/from_scwrl_1993481034.pdb > /var/tmp/scwrl_1993481034.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1993481034.pdb # conformation set from SCWRL output # naming current conformation LOOPP_TS5-scwrl # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1621242781.pdb -s /var/tmp/to_scwrl_1621242781.seq -o /var/tmp/from_scwrl_1621242781.pdb > /var/tmp/scwrl_1621242781.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1621242781.pdb # conformation set from SCWRL output # naming current conformation Ma-OPUS-server_TS1-scwrl # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2040055109.pdb -s /var/tmp/to_scwrl_2040055109.seq -o /var/tmp/from_scwrl_2040055109.pdb > /var/tmp/scwrl_2040055109.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2040055109.pdb # conformation set from SCWRL output # naming current conformation Ma-OPUS-server_TS2-scwrl # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_885855382.pdb -s /var/tmp/to_scwrl_885855382.seq -o /var/tmp/from_scwrl_885855382.pdb > /var/tmp/scwrl_885855382.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_885855382.pdb # conformation set from SCWRL output # naming current conformation Ma-OPUS-server_TS3-scwrl # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1 # Found a chain break before 326 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_123912961.pdb -s /var/tmp/to_scwrl_123912961.seq -o /var/tmp/from_scwrl_123912961.pdb > /var/tmp/scwrl_123912961.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_123912961.pdb # conformation set from SCWRL output # naming current conformation Ma-OPUS-server_TS4-scwrl # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1 # Found a chain break before 331 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_922862885.pdb -s /var/tmp/to_scwrl_922862885.seq -o /var/tmp/from_scwrl_922862885.pdb > /var/tmp/scwrl_922862885.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_922862885.pdb # conformation set from SCWRL output # naming current conformation Ma-OPUS-server_TS5-scwrl # ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1649765862.pdb -s /var/tmp/to_scwrl_1649765862.seq -o /var/tmp/from_scwrl_1649765862.pdb > /var/tmp/scwrl_1649765862.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1649765862.pdb # conformation set from SCWRL output # naming current conformation MetaTasser_TS1-scwrl # ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1 # Found a chain break before 321 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2075611941.pdb -s /var/tmp/to_scwrl_2075611941.seq -o /var/tmp/from_scwrl_2075611941.pdb > /var/tmp/scwrl_2075611941.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2075611941.pdb # conformation set from SCWRL output # naming current conformation MetaTasser_TS2-scwrl # ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1828761884.pdb -s /var/tmp/to_scwrl_1828761884.seq -o /var/tmp/from_scwrl_1828761884.pdb > /var/tmp/scwrl_1828761884.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1828761884.pdb # conformation set from SCWRL output # naming current conformation MetaTasser_TS3-scwrl # ReadConformPDB reading from PDB file servers/MetaTasser_TS4.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1144002306.pdb -s /var/tmp/to_scwrl_1144002306.seq -o /var/tmp/from_scwrl_1144002306.pdb > /var/tmp/scwrl_1144002306.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1144002306.pdb # conformation set from SCWRL output # naming current conformation MetaTasser_TS4-scwrl # ReadConformPDB reading from PDB file servers/MetaTasser_TS5.pdb.gz looking for model 1 # Found a chain break before 332 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_561466318.pdb -s /var/tmp/to_scwrl_561466318.seq -o /var/tmp/from_scwrl_561466318.pdb > /var/tmp/scwrl_561466318.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_561466318.pdb # conformation set from SCWRL output # naming current conformation MetaTasser_TS5-scwrl # ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation NN_PUT_lab_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1164457686.pdb -s /var/tmp/to_scwrl_1164457686.seq -o /var/tmp/from_scwrl_1164457686.pdb > /var/tmp/scwrl_1164457686.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1164457686.pdb # conformation set from SCWRL output # naming current conformation NN_PUT_lab_TS1-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_546153580.pdb -s /var/tmp/to_scwrl_546153580.seq -o /var/tmp/from_scwrl_546153580.pdb > /var/tmp/scwrl_546153580.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_546153580.pdb # conformation set from SCWRL output # naming current conformation PROTINFO-AB_TS1-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_28817518.pdb -s /var/tmp/to_scwrl_28817518.seq -o /var/tmp/from_scwrl_28817518.pdb > /var/tmp/scwrl_28817518.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_28817518.pdb # conformation set from SCWRL output # naming current conformation PROTINFO-AB_TS2-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1555268396.pdb -s /var/tmp/to_scwrl_1555268396.seq -o /var/tmp/from_scwrl_1555268396.pdb > /var/tmp/scwrl_1555268396.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1555268396.pdb # conformation set from SCWRL output # naming current conformation PROTINFO-AB_TS3-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_282905871.pdb -s /var/tmp/to_scwrl_282905871.seq -o /var/tmp/from_scwrl_282905871.pdb > /var/tmp/scwrl_282905871.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_282905871.pdb # conformation set from SCWRL output # naming current conformation PROTINFO-AB_TS4-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_994121207.pdb -s /var/tmp/to_scwrl_994121207.seq -o /var/tmp/from_scwrl_994121207.pdb > /var/tmp/scwrl_994121207.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_994121207.pdb # conformation set from SCWRL output # naming current conformation PROTINFO-AB_TS5-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1754089340.pdb -s /var/tmp/to_scwrl_1754089340.seq -o /var/tmp/from_scwrl_1754089340.pdb > /var/tmp/scwrl_1754089340.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1754089340.pdb # conformation set from SCWRL output # naming current conformation PROTINFO_TS1-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1650138375.pdb -s /var/tmp/to_scwrl_1650138375.seq -o /var/tmp/from_scwrl_1650138375.pdb > /var/tmp/scwrl_1650138375.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1650138375.pdb # conformation set from SCWRL output # naming current conformation PROTINFO_TS2-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1 # Found a chain break before 317 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1110968964.pdb -s /var/tmp/to_scwrl_1110968964.seq -o /var/tmp/from_scwrl_1110968964.pdb > /var/tmp/scwrl_1110968964.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1110968964.pdb # conformation set from SCWRL output # naming current conformation PROTINFO_TS3-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1 # naming current conformation PROTINFO_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1943304317.pdb -s /var/tmp/to_scwrl_1943304317.seq -o /var/tmp/from_scwrl_1943304317.pdb > /var/tmp/scwrl_1943304317.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1943304317.pdb # conformation set from SCWRL output # naming current conformation PROTINFO_TS4-scwrl # ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1 # naming current conformation PROTINFO_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_989337721.pdb -s /var/tmp/to_scwrl_989337721.seq -o /var/tmp/from_scwrl_989337721.pdb > /var/tmp/scwrl_989337721.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_989337721.pdb # conformation set from SCWRL output # naming current conformation PROTINFO_TS5-scwrl # ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pcons6_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_655208426.pdb -s /var/tmp/to_scwrl_655208426.seq -o /var/tmp/from_scwrl_655208426.pdb > /var/tmp/scwrl_655208426.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_655208426.pdb # conformation set from SCWRL output # naming current conformation Pcons6_TS1-scwrl # ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pcons6_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1776913287.pdb -s /var/tmp/to_scwrl_1776913287.seq -o /var/tmp/from_scwrl_1776913287.pdb > /var/tmp/scwrl_1776913287.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1776913287.pdb # conformation set from SCWRL output # naming current conformation Pcons6_TS2-scwrl # ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pcons6_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1468990881.pdb -s /var/tmp/to_scwrl_1468990881.seq -o /var/tmp/from_scwrl_1468990881.pdb > /var/tmp/scwrl_1468990881.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1468990881.pdb # conformation set from SCWRL output # naming current conformation Pcons6_TS3-scwrl # ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pcons6_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1245007038.pdb -s /var/tmp/to_scwrl_1245007038.seq -o /var/tmp/from_scwrl_1245007038.pdb > /var/tmp/scwrl_1245007038.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1245007038.pdb # conformation set from SCWRL output # naming current conformation Pcons6_TS4-scwrl # ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pcons6_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_296391726.pdb -s /var/tmp/to_scwrl_296391726.seq -o /var/tmp/from_scwrl_296391726.pdb > /var/tmp/scwrl_296391726.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_296391726.pdb # conformation set from SCWRL output # naming current conformation Pcons6_TS5-scwrl # ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Phyre-1_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2062992722.pdb -s /var/tmp/to_scwrl_2062992722.seq -o /var/tmp/from_scwrl_2062992722.pdb > /var/tmp/scwrl_2062992722.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2062992722.pdb # conformation set from SCWRL output # naming current conformation Phyre-1_TS1-scwrl # ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_455257857.pdb -s /var/tmp/to_scwrl_455257857.seq -o /var/tmp/from_scwrl_455257857.pdb > /var/tmp/scwrl_455257857.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_455257857.pdb # conformation set from SCWRL output # naming current conformation Phyre-2_TS1-scwrl # ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_318304346.pdb -s /var/tmp/to_scwrl_318304346.seq -o /var/tmp/from_scwrl_318304346.pdb > /var/tmp/scwrl_318304346.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_318304346.pdb # conformation set from SCWRL output # naming current conformation Phyre-2_TS2-scwrl # ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_370163561.pdb -s /var/tmp/to_scwrl_370163561.seq -o /var/tmp/from_scwrl_370163561.pdb > /var/tmp/scwrl_370163561.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_370163561.pdb # conformation set from SCWRL output # naming current conformation Phyre-2_TS3-scwrl # ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_301255245.pdb -s /var/tmp/to_scwrl_301255245.seq -o /var/tmp/from_scwrl_301255245.pdb > /var/tmp/scwrl_301255245.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_301255245.pdb # conformation set from SCWRL output # naming current conformation Phyre-2_TS4-scwrl # ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1939547127.pdb -s /var/tmp/to_scwrl_1939547127.seq -o /var/tmp/from_scwrl_1939547127.pdb > /var/tmp/scwrl_1939547127.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1939547127.pdb # conformation set from SCWRL output # naming current conformation Phyre-2_TS5-scwrl # ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_262735024.pdb -s /var/tmp/to_scwrl_262735024.seq -o /var/tmp/from_scwrl_262735024.pdb > /var/tmp/scwrl_262735024.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_262735024.pdb # conformation set from SCWRL output # naming current conformation Pmodeller6_TS1-scwrl # ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1187110626.pdb -s /var/tmp/to_scwrl_1187110626.seq -o /var/tmp/from_scwrl_1187110626.pdb > /var/tmp/scwrl_1187110626.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1187110626.pdb # conformation set from SCWRL output # naming current conformation Pmodeller6_TS2-scwrl # ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2063460088.pdb -s /var/tmp/to_scwrl_2063460088.seq -o /var/tmp/from_scwrl_2063460088.pdb > /var/tmp/scwrl_2063460088.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2063460088.pdb # conformation set from SCWRL output # naming current conformation Pmodeller6_TS3-scwrl # ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1185597908.pdb -s /var/tmp/to_scwrl_1185597908.seq -o /var/tmp/from_scwrl_1185597908.pdb > /var/tmp/scwrl_1185597908.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1185597908.pdb # conformation set from SCWRL output # naming current conformation Pmodeller6_TS4-scwrl # ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_689392842.pdb -s /var/tmp/to_scwrl_689392842.seq -o /var/tmp/from_scwrl_689392842.pdb > /var/tmp/scwrl_689392842.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_689392842.pdb # conformation set from SCWRL output # naming current conformation Pmodeller6_TS5-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1991588383.pdb -s /var/tmp/to_scwrl_1991588383.seq -o /var/tmp/from_scwrl_1991588383.pdb > /var/tmp/scwrl_1991588383.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1991588383.pdb # conformation set from SCWRL output # naming current conformation RAPTOR-ACE_TS1-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_866876146.pdb -s /var/tmp/to_scwrl_866876146.seq -o /var/tmp/from_scwrl_866876146.pdb > /var/tmp/scwrl_866876146.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_866876146.pdb # conformation set from SCWRL output # naming current conformation RAPTOR-ACE_TS2-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1833395148.pdb -s /var/tmp/to_scwrl_1833395148.seq -o /var/tmp/from_scwrl_1833395148.pdb > /var/tmp/scwrl_1833395148.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1833395148.pdb # conformation set from SCWRL output # naming current conformation RAPTOR-ACE_TS3-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_405571054.pdb -s /var/tmp/to_scwrl_405571054.seq -o /var/tmp/from_scwrl_405571054.pdb > /var/tmp/scwrl_405571054.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_405571054.pdb # conformation set from SCWRL output # naming current conformation RAPTOR-ACE_TS4-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2031333832.pdb -s /var/tmp/to_scwrl_2031333832.seq -o /var/tmp/from_scwrl_2031333832.pdb > /var/tmp/scwrl_2031333832.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2031333832.pdb # conformation set from SCWRL output # naming current conformation RAPTOR-ACE_TS5-scwrl # ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1 # Found a chain break before 317 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_232065081.pdb -s /var/tmp/to_scwrl_232065081.seq -o /var/tmp/from_scwrl_232065081.pdb > /var/tmp/scwrl_232065081.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_232065081.pdb # conformation set from SCWRL output # naming current conformation RAPTORESS_TS1-scwrl # ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1 # Found a chain break before 312 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_434388573.pdb -s /var/tmp/to_scwrl_434388573.seq -o /var/tmp/from_scwrl_434388573.pdb > /var/tmp/scwrl_434388573.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_434388573.pdb # conformation set from SCWRL output # naming current conformation RAPTORESS_TS2-scwrl # ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1 # Found a chain break before 310 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1439118581.pdb -s /var/tmp/to_scwrl_1439118581.seq -o /var/tmp/from_scwrl_1439118581.pdb > /var/tmp/scwrl_1439118581.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1439118581.pdb # conformation set from SCWRL output # naming current conformation RAPTORESS_TS3-scwrl # ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1 # Found a chain break before 327 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_514970953.pdb -s /var/tmp/to_scwrl_514970953.seq -o /var/tmp/from_scwrl_514970953.pdb > /var/tmp/scwrl_514970953.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_514970953.pdb # conformation set from SCWRL output # naming current conformation RAPTORESS_TS4-scwrl # ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1 # Found a chain break before 331 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1428509779.pdb -s /var/tmp/to_scwrl_1428509779.seq -o /var/tmp/from_scwrl_1428509779.pdb > /var/tmp/scwrl_1428509779.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1428509779.pdb # conformation set from SCWRL output # naming current conformation RAPTORESS_TS5-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1 # Found a chain break before 326 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1045724275.pdb -s /var/tmp/to_scwrl_1045724275.seq -o /var/tmp/from_scwrl_1045724275.pdb > /var/tmp/scwrl_1045724275.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1045724275.pdb # conformation set from SCWRL output # naming current conformation RAPTOR_TS1-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1 # Found a chain break before 334 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_17625681.pdb -s /var/tmp/to_scwrl_17625681.seq -o /var/tmp/from_scwrl_17625681.pdb > /var/tmp/scwrl_17625681.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_17625681.pdb # conformation set from SCWRL output # naming current conformation RAPTOR_TS2-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1 # Found a chain break before 334 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_391995097.pdb -s /var/tmp/to_scwrl_391995097.seq -o /var/tmp/from_scwrl_391995097.pdb > /var/tmp/scwrl_391995097.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_391995097.pdb # conformation set from SCWRL output # naming current conformation RAPTOR_TS3-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1 # Found a chain break before 334 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_841544945.pdb -s /var/tmp/to_scwrl_841544945.seq -o /var/tmp/from_scwrl_841544945.pdb > /var/tmp/scwrl_841544945.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_841544945.pdb # conformation set from SCWRL output # naming current conformation RAPTOR_TS4-scwrl # ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1006963402.pdb -s /var/tmp/to_scwrl_1006963402.seq -o /var/tmp/from_scwrl_1006963402.pdb > /var/tmp/scwrl_1006963402.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1006963402.pdb # conformation set from SCWRL output # naming current conformation RAPTOR_TS5-scwrl # ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1 # Found a chain break before 318 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1047203524.pdb -s /var/tmp/to_scwrl_1047203524.seq -o /var/tmp/from_scwrl_1047203524.pdb > /var/tmp/scwrl_1047203524.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1047203524.pdb # conformation set from SCWRL output # naming current conformation ROBETTA_TS1-scwrl # ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1 # Found a chain break before 319 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_470974585.pdb -s /var/tmp/to_scwrl_470974585.seq -o /var/tmp/from_scwrl_470974585.pdb > /var/tmp/scwrl_470974585.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_470974585.pdb # conformation set from SCWRL output # naming current conformation ROBETTA_TS2-scwrl # ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1 # Found a chain break before 317 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_328470636.pdb -s /var/tmp/to_scwrl_328470636.seq -o /var/tmp/from_scwrl_328470636.pdb > /var/tmp/scwrl_328470636.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_328470636.pdb # conformation set from SCWRL output # naming current conformation ROBETTA_TS3-scwrl # ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1 # Found a chain break before 315 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_144726915.pdb -s /var/tmp/to_scwrl_144726915.seq -o /var/tmp/from_scwrl_144726915.pdb > /var/tmp/scwrl_144726915.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_144726915.pdb # conformation set from SCWRL output # naming current conformation ROBETTA_TS4-scwrl # ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1 # Found a chain break before 319 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_767366311.pdb -s /var/tmp/to_scwrl_767366311.seq -o /var/tmp/from_scwrl_767366311.pdb > /var/tmp/scwrl_767366311.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_767366311.pdb # conformation set from SCWRL output # naming current conformation ROBETTA_TS5-scwrl # ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_243979711.pdb -s /var/tmp/to_scwrl_243979711.seq -o /var/tmp/from_scwrl_243979711.pdb > /var/tmp/scwrl_243979711.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_243979711.pdb # conformation set from SCWRL output # naming current conformation ROKKY_TS1-scwrl # ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_599984772.pdb -s /var/tmp/to_scwrl_599984772.seq -o /var/tmp/from_scwrl_599984772.pdb > /var/tmp/scwrl_599984772.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_599984772.pdb # conformation set from SCWRL output # naming current conformation ROKKY_TS2-scwrl # ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1085670656.pdb -s /var/tmp/to_scwrl_1085670656.seq -o /var/tmp/from_scwrl_1085670656.pdb > /var/tmp/scwrl_1085670656.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1085670656.pdb # conformation set from SCWRL output # naming current conformation ROKKY_TS3-scwrl # ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_614143273.pdb -s /var/tmp/to_scwrl_614143273.seq -o /var/tmp/from_scwrl_614143273.pdb > /var/tmp/scwrl_614143273.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_614143273.pdb # conformation set from SCWRL output # naming current conformation ROKKY_TS4-scwrl # ReadConformPDB reading from PDB file servers/ROKKY_TS5.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_901240017.pdb -s /var/tmp/to_scwrl_901240017.seq -o /var/tmp/from_scwrl_901240017.pdb > /var/tmp/scwrl_901240017.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_901240017.pdb # conformation set from SCWRL output # naming current conformation ROKKY_TS5-scwrl # ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_877734138.pdb -s /var/tmp/to_scwrl_877734138.seq -o /var/tmp/from_scwrl_877734138.pdb > /var/tmp/scwrl_877734138.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_877734138.pdb # conformation set from SCWRL output # naming current conformation SAM-T02_AL1-scwrl # ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_876878297.pdb -s /var/tmp/to_scwrl_876878297.seq -o /var/tmp/from_scwrl_876878297.pdb > /var/tmp/scwrl_876878297.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_876878297.pdb # conformation set from SCWRL output # naming current conformation SAM-T02_AL2-scwrl # ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2088350643.pdb -s /var/tmp/to_scwrl_2088350643.seq -o /var/tmp/from_scwrl_2088350643.pdb > /var/tmp/scwrl_2088350643.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2088350643.pdb # conformation set from SCWRL output # naming current conformation SAM-T02_AL3-scwrl # ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_793710579.pdb -s /var/tmp/to_scwrl_793710579.seq -o /var/tmp/from_scwrl_793710579.pdb > /var/tmp/scwrl_793710579.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_793710579.pdb # conformation set from SCWRL output # naming current conformation SAM-T02_AL4-scwrl # ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2062476205.pdb -s /var/tmp/to_scwrl_2062476205.seq -o /var/tmp/from_scwrl_2062476205.pdb > /var/tmp/scwrl_2062476205.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2062476205.pdb # conformation set from SCWRL output # naming current conformation SAM-T02_AL5-scwrl # ReadConformPDB reading from PDB file servers/SAM-T99_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_630259839.pdb -s /var/tmp/to_scwrl_630259839.seq -o /var/tmp/from_scwrl_630259839.pdb > /var/tmp/scwrl_630259839.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_630259839.pdb # conformation set from SCWRL output # naming current conformation SAM-T99_AL1-scwrl # ReadConformPDB reading from PDB file servers/SAM-T99_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_637815315.pdb -s /var/tmp/to_scwrl_637815315.seq -o /var/tmp/from_scwrl_637815315.pdb > /var/tmp/scwrl_637815315.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_637815315.pdb # conformation set from SCWRL output # naming current conformation SAM-T99_AL2-scwrl # ReadConformPDB reading from PDB file servers/SAM-T99_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_781868704.pdb -s /var/tmp/to_scwrl_781868704.seq -o /var/tmp/from_scwrl_781868704.pdb > /var/tmp/scwrl_781868704.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_781868704.pdb # conformation set from SCWRL output # naming current conformation SAM-T99_AL3-scwrl # ReadConformPDB reading from PDB file servers/SAM-T99_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_316171340.pdb -s /var/tmp/to_scwrl_316171340.seq -o /var/tmp/from_scwrl_316171340.pdb > /var/tmp/scwrl_316171340.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_316171340.pdb # conformation set from SCWRL output # naming current conformation SAM-T99_AL4-scwrl # ReadConformPDB reading from PDB file servers/SAM-T99_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1043386370.pdb -s /var/tmp/to_scwrl_1043386370.seq -o /var/tmp/from_scwrl_1043386370.pdb > /var/tmp/scwrl_1043386370.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1043386370.pdb # conformation set from SCWRL output # naming current conformation SAM-T99_AL5-scwrl # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SAM_T06_server_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_665718889.pdb -s /var/tmp/to_scwrl_665718889.seq -o /var/tmp/from_scwrl_665718889.pdb > /var/tmp/scwrl_665718889.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_665718889.pdb # conformation set from SCWRL output # naming current conformation SAM_T06_server_TS1-scwrl # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_548236422.pdb -s /var/tmp/to_scwrl_548236422.seq -o /var/tmp/from_scwrl_548236422.pdb > /var/tmp/scwrl_548236422.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_548236422.pdb # conformation set from SCWRL output # naming current conformation SAM_T06_server_TS2-scwrl # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1477774942.pdb -s /var/tmp/to_scwrl_1477774942.seq -o /var/tmp/from_scwrl_1477774942.pdb > /var/tmp/scwrl_1477774942.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1477774942.pdb # conformation set from SCWRL output # naming current conformation SAM_T06_server_TS3-scwrl # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2104837470.pdb -s /var/tmp/to_scwrl_2104837470.seq -o /var/tmp/from_scwrl_2104837470.pdb > /var/tmp/scwrl_2104837470.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2104837470.pdb # conformation set from SCWRL output # naming current conformation SAM_T06_server_TS4-scwrl # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1063207375.pdb -s /var/tmp/to_scwrl_1063207375.seq -o /var/tmp/from_scwrl_1063207375.pdb > /var/tmp/scwrl_1063207375.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1063207375.pdb # conformation set from SCWRL output # naming current conformation SAM_T06_server_TS5-scwrl # ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SP3_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_758801075.pdb -s /var/tmp/to_scwrl_758801075.seq -o /var/tmp/from_scwrl_758801075.pdb > /var/tmp/scwrl_758801075.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_758801075.pdb # conformation set from SCWRL output # naming current conformation SP3_TS1-scwrl # ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SP3_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1003078099.pdb -s /var/tmp/to_scwrl_1003078099.seq -o /var/tmp/from_scwrl_1003078099.pdb > /var/tmp/scwrl_1003078099.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1003078099.pdb # conformation set from SCWRL output # naming current conformation SP3_TS2-scwrl # ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SP3_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1080833055.pdb -s /var/tmp/to_scwrl_1080833055.seq -o /var/tmp/from_scwrl_1080833055.pdb > /var/tmp/scwrl_1080833055.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1080833055.pdb # conformation set from SCWRL output # naming current conformation SP3_TS3-scwrl # ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SP3_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1150796172.pdb -s /var/tmp/to_scwrl_1150796172.seq -o /var/tmp/from_scwrl_1150796172.pdb > /var/tmp/scwrl_1150796172.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1150796172.pdb # conformation set from SCWRL output # naming current conformation SP3_TS4-scwrl # ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1 # Found a chain break before 328 # copying to AlignedFragments data structure # naming current conformation SP3_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1844623043.pdb -s /var/tmp/to_scwrl_1844623043.seq -o /var/tmp/from_scwrl_1844623043.pdb > /var/tmp/scwrl_1844623043.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1844623043.pdb # conformation set from SCWRL output # naming current conformation SP3_TS5-scwrl # ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SP4_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2087796458.pdb -s /var/tmp/to_scwrl_2087796458.seq -o /var/tmp/from_scwrl_2087796458.pdb > /var/tmp/scwrl_2087796458.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2087796458.pdb # conformation set from SCWRL output # naming current conformation SP4_TS1-scwrl # ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SP4_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_50516049.pdb -s /var/tmp/to_scwrl_50516049.seq -o /var/tmp/from_scwrl_50516049.pdb > /var/tmp/scwrl_50516049.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_50516049.pdb # conformation set from SCWRL output # naming current conformation SP4_TS2-scwrl # ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation SP4_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_168113982.pdb -s /var/tmp/to_scwrl_168113982.seq -o /var/tmp/from_scwrl_168113982.pdb > /var/tmp/scwrl_168113982.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_168113982.pdb # conformation set from SCWRL output # naming current conformation SP4_TS3-scwrl # ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation SP4_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_268783447.pdb -s /var/tmp/to_scwrl_268783447.seq -o /var/tmp/from_scwrl_268783447.pdb > /var/tmp/scwrl_268783447.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_268783447.pdb # conformation set from SCWRL output # naming current conformation SP4_TS4-scwrl # ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1 # Found a chain break before 327 # copying to AlignedFragments data structure # naming current conformation SP4_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_195242964.pdb -s /var/tmp/to_scwrl_195242964.seq -o /var/tmp/from_scwrl_195242964.pdb > /var/tmp/scwrl_195242964.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_195242964.pdb # conformation set from SCWRL output # naming current conformation SP4_TS5-scwrl # ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_935480293.pdb -s /var/tmp/to_scwrl_935480293.seq -o /var/tmp/from_scwrl_935480293.pdb > /var/tmp/scwrl_935480293.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_935480293.pdb # conformation set from SCWRL output # naming current conformation SPARKS2_TS1-scwrl # ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1 # Found a chain break before 326 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_512763159.pdb -s /var/tmp/to_scwrl_512763159.seq -o /var/tmp/from_scwrl_512763159.pdb > /var/tmp/scwrl_512763159.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_512763159.pdb # conformation set from SCWRL output # naming current conformation SPARKS2_TS2-scwrl # ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_795227736.pdb -s /var/tmp/to_scwrl_795227736.seq -o /var/tmp/from_scwrl_795227736.pdb > /var/tmp/scwrl_795227736.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_795227736.pdb # conformation set from SCWRL output # naming current conformation SPARKS2_TS3-scwrl # ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1 # Found a chain break before 334 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2021150950.pdb -s /var/tmp/to_scwrl_2021150950.seq -o /var/tmp/from_scwrl_2021150950.pdb > /var/tmp/scwrl_2021150950.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2021150950.pdb # conformation set from SCWRL output # naming current conformation SPARKS2_TS4-scwrl # ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1 # Found a chain break before 330 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1126906431.pdb -s /var/tmp/to_scwrl_1126906431.seq -o /var/tmp/from_scwrl_1126906431.pdb > /var/tmp/scwrl_1126906431.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1126906431.pdb # conformation set from SCWRL output # naming current conformation SPARKS2_TS5-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1696467753.pdb -s /var/tmp/to_scwrl_1696467753.seq -o /var/tmp/from_scwrl_1696467753.pdb > /var/tmp/scwrl_1696467753.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1696467753.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_bnmx_TS1-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_751401441.pdb -s /var/tmp/to_scwrl_751401441.seq -o /var/tmp/from_scwrl_751401441.pdb > /var/tmp/scwrl_751401441.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_751401441.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_bnmx_TS2-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2003784728.pdb -s /var/tmp/to_scwrl_2003784728.seq -o /var/tmp/from_scwrl_2003784728.pdb > /var/tmp/scwrl_2003784728.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2003784728.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_bnmx_TS3-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1637334749.pdb -s /var/tmp/to_scwrl_1637334749.seq -o /var/tmp/from_scwrl_1637334749.pdb > /var/tmp/scwrl_1637334749.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1637334749.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_bnmx_TS4-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1545112019.pdb -s /var/tmp/to_scwrl_1545112019.seq -o /var/tmp/from_scwrl_1545112019.pdb > /var/tmp/scwrl_1545112019.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1545112019.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_bnmx_TS5-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation UNI-EID_expm_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1918777286.pdb -s /var/tmp/to_scwrl_1918777286.seq -o /var/tmp/from_scwrl_1918777286.pdb > /var/tmp/scwrl_1918777286.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1918777286.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_expm_TS1-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_120110941.pdb -s /var/tmp/to_scwrl_120110941.seq -o /var/tmp/from_scwrl_120110941.pdb > /var/tmp/scwrl_120110941.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_120110941.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_sfst_AL1-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_35443688.pdb -s /var/tmp/to_scwrl_35443688.seq -o /var/tmp/from_scwrl_35443688.pdb > /var/tmp/scwrl_35443688.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_35443688.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_sfst_AL2-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_553162343.pdb -s /var/tmp/to_scwrl_553162343.seq -o /var/tmp/from_scwrl_553162343.pdb > /var/tmp/scwrl_553162343.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_553162343.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_sfst_AL3-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_436282282.pdb -s /var/tmp/to_scwrl_436282282.seq -o /var/tmp/from_scwrl_436282282.pdb > /var/tmp/scwrl_436282282.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_436282282.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_sfst_AL4-scwrl # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1078830057.pdb -s /var/tmp/to_scwrl_1078830057.seq -o /var/tmp/from_scwrl_1078830057.pdb > /var/tmp/scwrl_1078830057.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1078830057.pdb # conformation set from SCWRL output # naming current conformation UNI-EID_sfst_AL5-scwrl # ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1 # Found a chain break before 319 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1218881231.pdb -s /var/tmp/to_scwrl_1218881231.seq -o /var/tmp/from_scwrl_1218881231.pdb > /var/tmp/scwrl_1218881231.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1218881231.pdb # conformation set from SCWRL output # naming current conformation Zhang-Server_TS1-scwrl # ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_984518704.pdb -s /var/tmp/to_scwrl_984518704.seq -o /var/tmp/from_scwrl_984518704.pdb > /var/tmp/scwrl_984518704.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_984518704.pdb # conformation set from SCWRL output # naming current conformation Zhang-Server_TS2-scwrl # ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_409121353.pdb -s /var/tmp/to_scwrl_409121353.seq -o /var/tmp/from_scwrl_409121353.pdb > /var/tmp/scwrl_409121353.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_409121353.pdb # conformation set from SCWRL output # naming current conformation Zhang-Server_TS3-scwrl # ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1 # Found a chain break before 320 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1176235054.pdb -s /var/tmp/to_scwrl_1176235054.seq -o /var/tmp/from_scwrl_1176235054.pdb > /var/tmp/scwrl_1176235054.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1176235054.pdb # conformation set from SCWRL output # naming current conformation Zhang-Server_TS4-scwrl # ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2047726078.pdb -s /var/tmp/to_scwrl_2047726078.seq -o /var/tmp/from_scwrl_2047726078.pdb > /var/tmp/scwrl_2047726078.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2047726078.pdb # conformation set from SCWRL output # naming current conformation Zhang-Server_TS5-scwrl # ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation beautshot_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1167922427.pdb -s /var/tmp/to_scwrl_1167922427.seq -o /var/tmp/from_scwrl_1167922427.pdb > /var/tmp/scwrl_1167922427.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1167922427.pdb # conformation set from SCWRL output # naming current conformation beautshot_TS1-scwrl # ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation beautshotbase_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_31829506.pdb -s /var/tmp/to_scwrl_31829506.seq -o /var/tmp/from_scwrl_31829506.pdb > /var/tmp/scwrl_31829506.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_31829506.pdb # conformation set from SCWRL output # naming current conformation beautshotbase_TS1-scwrl # ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation forecast-s_AL1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_981075487.pdb -s /var/tmp/to_scwrl_981075487.seq -o /var/tmp/from_scwrl_981075487.pdb > /var/tmp/scwrl_981075487.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_981075487.pdb # conformation set from SCWRL output # naming current conformation forecast-s_AL1-scwrl # ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1 Skipped atom 553, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL2.pdb.gz Skipped atom 554, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL2.pdb.gz Skipped atom 555, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL2.pdb.gz Skipped atom 556, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL2.pdb.gz # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation forecast-s_AL2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_171234953.pdb -s /var/tmp/to_scwrl_171234953.seq -o /var/tmp/from_scwrl_171234953.pdb > /var/tmp/scwrl_171234953.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_171234953.pdb # conformation set from SCWRL output # naming current conformation forecast-s_AL2-scwrl # ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation forecast-s_AL3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1876452550.pdb -s /var/tmp/to_scwrl_1876452550.seq -o /var/tmp/from_scwrl_1876452550.pdb > /var/tmp/scwrl_1876452550.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1876452550.pdb # conformation set from SCWRL output # naming current conformation forecast-s_AL3-scwrl # ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation forecast-s_AL4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_921388298.pdb -s /var/tmp/to_scwrl_921388298.seq -o /var/tmp/from_scwrl_921388298.pdb > /var/tmp/scwrl_921388298.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_921388298.pdb # conformation set from SCWRL output # naming current conformation forecast-s_AL4-scwrl # ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation forecast-s_AL5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_221751002.pdb -s /var/tmp/to_scwrl_221751002.seq -o /var/tmp/from_scwrl_221751002.pdb > /var/tmp/scwrl_221751002.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_221751002.pdb # conformation set from SCWRL output # naming current conformation forecast-s_AL5-scwrl # ReadConformPDB reading from PDB file servers/gtg_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation gtg_AL1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2044566532.pdb -s /var/tmp/to_scwrl_2044566532.seq -o /var/tmp/from_scwrl_2044566532.pdb > /var/tmp/scwrl_2044566532.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2044566532.pdb # conformation set from SCWRL output # naming current conformation gtg_AL1-scwrl # ReadConformPDB reading from PDB file servers/gtg_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation gtg_AL2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1190171745.pdb -s /var/tmp/to_scwrl_1190171745.seq -o /var/tmp/from_scwrl_1190171745.pdb > /var/tmp/scwrl_1190171745.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1190171745.pdb # conformation set from SCWRL output # naming current conformation gtg_AL2-scwrl # ReadConformPDB reading from PDB file servers/gtg_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation gtg_AL3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_416993966.pdb -s /var/tmp/to_scwrl_416993966.seq -o /var/tmp/from_scwrl_416993966.pdb > /var/tmp/scwrl_416993966.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_416993966.pdb # conformation set from SCWRL output # naming current conformation gtg_AL3-scwrl # ReadConformPDB reading from PDB file servers/gtg_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation gtg_AL4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_832563178.pdb -s /var/tmp/to_scwrl_832563178.seq -o /var/tmp/from_scwrl_832563178.pdb > /var/tmp/scwrl_832563178.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_832563178.pdb # conformation set from SCWRL output # naming current conformation gtg_AL4-scwrl # ReadConformPDB reading from PDB file servers/gtg_AL5.pdb.gz looking for model 1 Skipped atom 118, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 120, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 122, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 124, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 126, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 128, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 130, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 132, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 134, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 136, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 138, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 140, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 142, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 144, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 146, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz Skipped atom 148, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation gtg_AL5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1702934904.pdb -s /var/tmp/to_scwrl_1702934904.seq -o /var/tmp/from_scwrl_1702934904.pdb > /var/tmp/scwrl_1702934904.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1702934904.pdb # conformation set from SCWRL output # naming current conformation gtg_AL5-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv.2_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1212221702.pdb -s /var/tmp/to_scwrl_1212221702.seq -o /var/tmp/from_scwrl_1212221702.pdb > /var/tmp/scwrl_1212221702.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1212221702.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.2_TS1-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv.2_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_706230481.pdb -s /var/tmp/to_scwrl_706230481.seq -o /var/tmp/from_scwrl_706230481.pdb > /var/tmp/scwrl_706230481.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_706230481.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.2_TS2-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv.2_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_682357689.pdb -s /var/tmp/to_scwrl_682357689.seq -o /var/tmp/from_scwrl_682357689.pdb > /var/tmp/scwrl_682357689.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_682357689.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.2_TS3-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv.2_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_761205809.pdb -s /var/tmp/to_scwrl_761205809.seq -o /var/tmp/from_scwrl_761205809.pdb > /var/tmp/scwrl_761205809.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_761205809.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.2_TS4-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv.2_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1457631921.pdb -s /var/tmp/to_scwrl_1457631921.seq -o /var/tmp/from_scwrl_1457631921.pdb > /var/tmp/scwrl_1457631921.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1457631921.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.2_TS5-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS2.pdb.gz looking for model 1 # Found a chain break before 333 # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_538658770.pdb -s /var/tmp/to_scwrl_538658770.seq -o /var/tmp/from_scwrl_538658770.pdb > /var/tmp/scwrl_538658770.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_538658770.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.4_TS2-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS3.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_251056911.pdb -s /var/tmp/to_scwrl_251056911.seq -o /var/tmp/from_scwrl_251056911.pdb > /var/tmp/scwrl_251056911.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_251056911.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.4_TS3-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS4.pdb.gz looking for model 1 WARNING: atoms too close: (T0298)L198.O and (T0298)A199.N only 0.000 apart, marking (T0298)A199.N as missing WARNING: atoms too close: (T0298)L327.O and (T0298)G328.N only 0.000 apart, marking (T0298)G328.N as missing # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_855260295.pdb -s /var/tmp/to_scwrl_855260295.seq -o /var/tmp/from_scwrl_855260295.pdb > /var/tmp/scwrl_855260295.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_855260295.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.4_TS4-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS5.pdb.gz looking for model 1 WARNING: atoms too close: (T0298)H32.O and (T0298)R33.N only 0.000 apart, marking (T0298)R33.N as missing WARNING: atoms too close: (T0298)D63.O and (T0298)F64.N only 0.000 apart, marking (T0298)F64.N as missing # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_309952409.pdb -s /var/tmp/to_scwrl_309952409.seq -o /var/tmp/from_scwrl_309952409.pdb > /var/tmp/scwrl_309952409.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_309952409.pdb # conformation set from SCWRL output # naming current conformation karypis.srv.4_TS5-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_371167853.pdb -s /var/tmp/to_scwrl_371167853.seq -o /var/tmp/from_scwrl_371167853.pdb > /var/tmp/scwrl_371167853.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_371167853.pdb # conformation set from SCWRL output # naming current conformation karypis.srv_TS1-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_890703983.pdb -s /var/tmp/to_scwrl_890703983.seq -o /var/tmp/from_scwrl_890703983.pdb > /var/tmp/scwrl_890703983.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_890703983.pdb # conformation set from SCWRL output # naming current conformation karypis.srv_TS2-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_863114752.pdb -s /var/tmp/to_scwrl_863114752.seq -o /var/tmp/from_scwrl_863114752.pdb > /var/tmp/scwrl_863114752.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_863114752.pdb # conformation set from SCWRL output # naming current conformation karypis.srv_TS3-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_807450135.pdb -s /var/tmp/to_scwrl_807450135.seq -o /var/tmp/from_scwrl_807450135.pdb > /var/tmp/scwrl_807450135.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_807450135.pdb # conformation set from SCWRL output # naming current conformation karypis.srv_TS4-scwrl # ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1969534040.pdb -s /var/tmp/to_scwrl_1969534040.seq -o /var/tmp/from_scwrl_1969534040.pdb > /var/tmp/scwrl_1969534040.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1969534040.pdb # conformation set from SCWRL output # naming current conformation karypis.srv_TS5-scwrl # ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1 # Found a chain break before 312 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_2081995983.pdb -s /var/tmp/to_scwrl_2081995983.seq -o /var/tmp/from_scwrl_2081995983.pdb > /var/tmp/scwrl_2081995983.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2081995983.pdb # conformation set from SCWRL output # naming current conformation keasar-server_TS1-scwrl # ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1 # Found a chain break before 247 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1791968838.pdb -s /var/tmp/to_scwrl_1791968838.seq -o /var/tmp/from_scwrl_1791968838.pdb > /var/tmp/scwrl_1791968838.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1791968838.pdb # conformation set from SCWRL output # naming current conformation keasar-server_TS2-scwrl # ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1 # Found a chain break before 311 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_231171746.pdb -s /var/tmp/to_scwrl_231171746.seq -o /var/tmp/from_scwrl_231171746.pdb > /var/tmp/scwrl_231171746.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_231171746.pdb # conformation set from SCWRL output # naming current conformation keasar-server_TS3-scwrl # ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1 # Found a chain break before 313 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1110747390.pdb -s /var/tmp/to_scwrl_1110747390.seq -o /var/tmp/from_scwrl_1110747390.pdb > /var/tmp/scwrl_1110747390.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1110747390.pdb # conformation set from SCWRL output # naming current conformation keasar-server_TS4-scwrl # ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1 # Found a chain break before 312 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1692211269.pdb -s /var/tmp/to_scwrl_1692211269.seq -o /var/tmp/from_scwrl_1692211269.pdb > /var/tmp/scwrl_1692211269.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1692211269.pdb # conformation set from SCWRL output # naming current conformation keasar-server_TS5-scwrl # ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation mGen-3D_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1399094173.pdb -s /var/tmp/to_scwrl_1399094173.seq -o /var/tmp/from_scwrl_1399094173.pdb > /var/tmp/scwrl_1399094173.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1399094173.pdb # conformation set from SCWRL output # naming current conformation mGen-3D_TS1-scwrl # ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation nFOLD_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1142576897.pdb -s /var/tmp/to_scwrl_1142576897.seq -o /var/tmp/from_scwrl_1142576897.pdb > /var/tmp/scwrl_1142576897.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1142576897.pdb # conformation set from SCWRL output # naming current conformation nFOLD_TS1-scwrl # ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation nFOLD_TS2 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_525803109.pdb -s /var/tmp/to_scwrl_525803109.seq -o /var/tmp/from_scwrl_525803109.pdb > /var/tmp/scwrl_525803109.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_525803109.pdb # conformation set from SCWRL output # naming current conformation nFOLD_TS2-scwrl # ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation nFOLD_TS3 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1570329127.pdb -s /var/tmp/to_scwrl_1570329127.seq -o /var/tmp/from_scwrl_1570329127.pdb > /var/tmp/scwrl_1570329127.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1570329127.pdb # conformation set from SCWRL output # naming current conformation nFOLD_TS3-scwrl # ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation nFOLD_TS4 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_871545801.pdb -s /var/tmp/to_scwrl_871545801.seq -o /var/tmp/from_scwrl_871545801.pdb > /var/tmp/scwrl_871545801.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_871545801.pdb # conformation set from SCWRL output # naming current conformation nFOLD_TS4-scwrl # ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation nFOLD_TS5 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1447191407.pdb -s /var/tmp/to_scwrl_1447191407.seq -o /var/tmp/from_scwrl_1447191407.pdb > /var/tmp/scwrl_1447191407.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1447191407.pdb # conformation set from SCWRL output # naming current conformation nFOLD_TS5-scwrl # ReadConformPDB reading from PDB file servers/panther2_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0298 can't currently be optimized by undertaker # naming current conformation panther2_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_1792080129.pdb -s /var/tmp/to_scwrl_1792080129.seq -o /var/tmp/from_scwrl_1792080129.pdb > /var/tmp/scwrl_1792080129.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1792080129.pdb # conformation set from SCWRL output # naming current conformation panther2_TS1-scwrl # ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1 # Found a chain break before 335 # copying to AlignedFragments data structure # naming current conformation shub_TS1 # request to SCWRL produces command: ulimit -t 303 ; scwrl -i /var/tmp/to_scwrl_768628686.pdb -s /var/tmp/to_scwrl_768628686.seq -o /var/tmp/from_scwrl_768628686.pdb > /var/tmp/scwrl_768628686.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_768628686.pdb # conformation set from SCWRL output # naming current conformation shub_TS1-scwrl # command:CPU_time= 95.7814 sec, elapsed time= 492.22 sec) # command:# Prefix for output files set to decoys/ # command:# Will now start reporting costs to decoys/evaluate.rdb # command:# CostConform Warning: Couldn't open file decoys//projects/compbio/experiments/undertaker/spots/near-backbone-center.spot or decoys//projects/compbio/experiments/undertaker/spots/near-backbone-center.spot.gz for input Trying /projects/compbio/experiments/undertaker/spots/near-backbone-center.spot # Reading spots from /projects/compbio/experiments/undertaker/spots/near-backbone-center.spot shub_TS1-scwrl costs 0 real_cost = -28.372 shub_TS1 costs 0 real_cost = -18.6464 panther2_TS1-scwrl costs 0 real_cost = 44.9088 panther2_TS1 costs 0 real_cost = 44.7558 nFOLD_TS5-scwrl costs 0 real_cost = 152.738 nFOLD_TS5 costs 0 real_cost = 265.27 nFOLD_TS4-scwrl costs 0 real_cost = 146.928 nFOLD_TS4 costs 0 real_cost = 253.657 nFOLD_TS3-scwrl costs 0 real_cost = 156.006 nFOLD_TS3 costs 0 real_cost = 269.668 nFOLD_TS2-scwrl costs 0 real_cost = 79.2126 nFOLD_TS2 costs 0 real_cost = 218.215 nFOLD_TS1-scwrl costs 0 real_cost = 35.6282 nFOLD_TS1 costs 0 real_cost = 175.409 mGen-3D_TS1-scwrl costs 0 real_cost = 49.4451 mGen-3D_TS1 costs 0 real_cost = 173.745 keasar-server_TS5-scwrl costs 0 real_cost = -54.4901 keasar-server_TS5 costs 0 real_cost = -49.8364 keasar-server_TS4-scwrl costs 0 real_cost = -103.359 keasar-server_TS4 costs 0 real_cost = -96.2859 keasar-server_TS3-scwrl costs 0 real_cost = -95.8481 keasar-server_TS3 costs 0 real_cost = -81.8405 keasar-server_TS2-scwrl costs 0 real_cost = -63.2093 keasar-server_TS2 costs 0 real_cost = -55.5555 keasar-server_TS1-scwrl costs 0 real_cost = -84.0945 keasar-server_TS1 costs 0 real_cost = -59.3789 karypis.srv_TS5-scwrl costs 0 real_cost = 270.878 karypis.srv_TS5 costs 0 real_cost = 269.82 karypis.srv_TS4-scwrl costs 0 real_cost = 430.138 karypis.srv_TS4 costs 0 real_cost = 423.363 karypis.srv_TS3-scwrl costs 0 real_cost = 192.125 karypis.srv_TS3 costs 0 real_cost = 180.585 karypis.srv_TS2-scwrl costs 0 real_cost = 228.914 karypis.srv_TS2 costs 0 real_cost = 218.68 karypis.srv_TS1-scwrl costs 0 real_cost = 162.866 karypis.srv_TS1 costs 0 real_cost = 151.211 karypis.srv.4_TS5-scwrl costs 0 real_cost = 355.232 karypis.srv.4_TS5 costs 0 real_cost = 356.431 karypis.srv.4_TS4-scwrl costs 0 real_cost = 358.905 karypis.srv.4_TS4 costs 0 real_cost = 359.117 karypis.srv.4_TS3-scwrl costs 0 real_cost = 351.005 karypis.srv.4_TS3 costs 0 real_cost = 350.803 karypis.srv.4_TS2-scwrl costs 0 real_cost = 328.981 karypis.srv.4_TS2 costs 0 real_cost = 329.214 karypis.srv.2_TS5-scwrl costs 0 real_cost = 169.903 karypis.srv.2_TS5 costs 0 real_cost = 167.322 karypis.srv.2_TS4-scwrl costs 0 real_cost = 148.832 karypis.srv.2_TS4 costs 0 real_cost = 146.203 karypis.srv.2_TS3-scwrl costs 0 real_cost = 163.077 karypis.srv.2_TS3 costs 0 real_cost = 160.613 karypis.srv.2_TS2-scwrl costs 0 real_cost = 153.182 karypis.srv.2_TS2 costs 0 real_cost = 148.424 karypis.srv.2_TS1-scwrl costs 0 real_cost = 165.674 karypis.srv.2_TS1 costs 0 real_cost = 162.322 gtg_AL5-scwrl costs 0 real_cost = 234.092 gtg_AL5 costs 0 real_cost = 361.33 gtg_AL4-scwrl costs 0 real_cost = 231.548 gtg_AL4 costs 0 real_cost = 357.697 gtg_AL3-scwrl costs 0 real_cost = 172.134 gtg_AL3 costs 0 real_cost = 296.009 gtg_AL2-scwrl costs 0 real_cost = 136.556 gtg_AL2 costs 0 real_cost = 288.095 gtg_AL1-scwrl costs 0 real_cost = 178.273 gtg_AL1 costs 0 real_cost = 308.956 forecast-s_AL5-scwrl costs 0 real_cost = 565.616 forecast-s_AL5 costs 0 real_cost = 662.12 forecast-s_AL4-scwrl costs 0 real_cost = 433.013 forecast-s_AL4 costs 0 real_cost = 592.273 forecast-s_AL3-scwrl costs 0 real_cost = 578.524 forecast-s_AL3 costs 0 real_cost = 654.293 forecast-s_AL2-scwrl costs 0 real_cost = 542.337 forecast-s_AL2 costs 0 real_cost = 640.323 forecast-s_AL1-scwrl costs 0 real_cost = 227.402 forecast-s_AL1 costs 0 real_cost = 340.479 beautshotbase_TS1-scwrl costs 0 real_cost = 99.2633 beautshotbase_TS1 costs 0 real_cost = 97.5203 beautshot_TS1-scwrl costs 0 real_cost = -40.1166 beautshot_TS1 costs 0 real_cost = -37.1839 Zhang-Server_TS5-scwrl costs 0 real_cost = 23.7128 Zhang-Server_TS5 costs 0 real_cost = 22.486 Zhang-Server_TS4-scwrl costs 0 real_cost = -22.1283 Zhang-Server_TS4 costs 0 real_cost = -19.3063 Zhang-Server_TS3-scwrl costs 0 real_cost = -166.192 Zhang-Server_TS3 costs 0 real_cost = -159.862 Zhang-Server_TS2-scwrl costs 0 real_cost = -162.065 Zhang-Server_TS2 costs 0 real_cost = -160.578 Zhang-Server_TS1-scwrl costs 0 real_cost = -155.985 Zhang-Server_TS1 costs 0 real_cost = -156.333 UNI-EID_sfst_AL5-scwrl costs 0 real_cost = 43.3091 UNI-EID_sfst_AL5 costs 0 real_cost = 219.787 UNI-EID_sfst_AL4-scwrl costs 0 real_cost = -23.5633 UNI-EID_sfst_AL4 costs 0 real_cost = 152.034 UNI-EID_sfst_AL3-scwrl costs 0 real_cost = -56.5799 UNI-EID_sfst_AL3 costs 0 real_cost = 134.909 UNI-EID_sfst_AL2-scwrl costs 0 real_cost = -38.2056 UNI-EID_sfst_AL2 costs 0 real_cost = 145.096 UNI-EID_sfst_AL1-scwrl costs 0 real_cost = -113.133 UNI-EID_sfst_AL1 costs 0 real_cost = 86.9823 UNI-EID_expm_TS1-scwrl costs 0 real_cost = -108.065 UNI-EID_expm_TS1 costs 0 real_cost = 37.7623 UNI-EID_bnmx_TS5-scwrl costs 0 real_cost = 64.3775 UNI-EID_bnmx_TS5 costs 0 real_cost = 243.811 UNI-EID_bnmx_TS4-scwrl costs 0 real_cost = -9.06898 UNI-EID_bnmx_TS4 costs 0 real_cost = 167.121 UNI-EID_bnmx_TS3-scwrl costs 0 real_cost = -71.888 UNI-EID_bnmx_TS3 costs 0 real_cost = 118.165 UNI-EID_bnmx_TS2-scwrl costs 0 real_cost = -58.1411 UNI-EID_bnmx_TS2 costs 0 real_cost = 121.345 UNI-EID_bnmx_TS1-scwrl costs 0 real_cost = -113.349 UNI-EID_bnmx_TS1 costs 0 real_cost = 87.0206 SPARKS2_TS5-scwrl costs 0 real_cost = 11.2844 SPARKS2_TS5 costs 0 real_cost = 9.14349 SPARKS2_TS4-scwrl costs 0 real_cost = -33.3019 SPARKS2_TS4 costs 0 real_cost = -25.4616 SPARKS2_TS3-scwrl costs 0 real_cost = 3.24331 SPARKS2_TS3 costs 0 real_cost = 10.4747 SPARKS2_TS2-scwrl costs 0 real_cost = -20.138 SPARKS2_TS2 costs 0 real_cost = -14.2783 SPARKS2_TS1-scwrl costs 0 real_cost = -141.432 SPARKS2_TS1 costs 0 real_cost = -146.552 SP4_TS5-scwrl costs 0 real_cost = 41.0491 SP4_TS5 costs 0 real_cost = 41.0527 SP4_TS4-scwrl costs 0 real_cost = 4.37685 SP4_TS4 costs 0 real_cost = 7.6521 SP4_TS3-scwrl costs 0 real_cost = 21.1736 SP4_TS3 costs 0 real_cost = 22.988 SP4_TS2-scwrl costs 0 real_cost = -15.4133 SP4_TS2 costs 0 real_cost = -20.8546 SP4_TS1-scwrl costs 0 real_cost = -146.414 SP4_TS1 costs 0 real_cost = -147.374 SP3_TS5-scwrl costs 0 real_cost = 12.8554 SP3_TS5 costs 0 real_cost = 19.3509 SP3_TS4-scwrl costs 0 real_cost = 25.0633 SP3_TS4 costs 0 real_cost = 30.7076 SP3_TS3-scwrl costs 0 real_cost = -10.0901 SP3_TS3 costs 0 real_cost = -4.08182 SP3_TS2-scwrl costs 0 real_cost = -13.8006 SP3_TS2 costs 0 real_cost = -13.2001 SP3_TS1-scwrl costs 0 real_cost = -145.226 SP3_TS1 costs 0 real_cost = -147.435 SAM_T06_server_TS5-scwrl costs 0 real_cost = 152.538 SAM_T06_server_TS5 costs 0 real_cost = 116.537 SAM_T06_server_TS4-scwrl costs 0 real_cost = 108.151 SAM_T06_server_TS4 costs 0 real_cost = 69.8616 SAM_T06_server_TS3-scwrl costs 0 real_cost = 71.6049 SAM_T06_server_TS3 costs 0 real_cost = 18.7302 SAM_T06_server_TS2-scwrl costs 0 real_cost = -75.3344 SAM_T06_server_TS2 costs 0 real_cost = -85.4807 SAM_T06_server_TS1-scwrl costs 0 real_cost = -133.432 SAM_T06_server_TS1 costs 0 real_cost = -129.058 SAM-T99_AL5-scwrl costs 0 real_cost = -62.3481 SAM-T99_AL5 costs 0 real_cost = 123.778 SAM-T99_AL4-scwrl costs 0 real_cost = -61.3004 SAM-T99_AL4 costs 0 real_cost = 124.003 SAM-T99_AL3-scwrl costs 0 real_cost = -48.3383 SAM-T99_AL3 costs 0 real_cost = 139.344 SAM-T99_AL2-scwrl costs 0 real_cost = -82.6174 SAM-T99_AL2 costs 0 real_cost = 109.891 SAM-T99_AL1-scwrl costs 0 real_cost = -80.5297 SAM-T99_AL1 costs 0 real_cost = 115.771 SAM-T02_AL5-scwrl costs 0 real_cost = 87.6017 SAM-T02_AL5 costs 0 real_cost = 262.35 SAM-T02_AL4-scwrl costs 0 real_cost = -93.7173 SAM-T02_AL4 costs 0 real_cost = 109.094 SAM-T02_AL3-scwrl costs 0 real_cost = -9.0149 SAM-T02_AL3 costs 0 real_cost = 177.901 SAM-T02_AL2-scwrl costs 0 real_cost = -77.2975 SAM-T02_AL2 costs 0 real_cost = 123.174 SAM-T02_AL1-scwrl costs 0 real_cost = -24.1516 SAM-T02_AL1 costs 0 real_cost = 159.913 ROKKY_TS5-scwrl costs 0 real_cost = -76.2173 ROKKY_TS5 costs 0 real_cost = -75.8451 ROKKY_TS4-scwrl costs 0 real_cost = -108.917 ROKKY_TS4 costs 0 real_cost = -104.693 ROKKY_TS3-scwrl costs 0 real_cost = -115.295 ROKKY_TS3 costs 0 real_cost = -107.301 ROKKY_TS2-scwrl costs 0 real_cost = -112.417 ROKKY_TS2 costs 0 real_cost = -109.941 ROKKY_TS1-scwrl costs 0 real_cost = 53.6872 ROKKY_TS1 costs 0 real_cost = 58.3798 ROBETTA_TS5-scwrl costs 0 real_cost = 51.8169 ROBETTA_TS5 costs 0 real_cost = 50.2411 ROBETTA_TS4-scwrl costs 0 real_cost = 48.9855 ROBETTA_TS4 costs 0 real_cost = 55.1937 ROBETTA_TS3-scwrl costs 0 real_cost = 55.9767 ROBETTA_TS3 costs 0 real_cost = 58.5429 ROBETTA_TS2-scwrl costs 0 real_cost = 36.9661 ROBETTA_TS2 costs 0 real_cost = 43.5473 ROBETTA_TS1-scwrl costs 0 real_cost = 57.795 ROBETTA_TS1 costs 0 real_cost = 61.2093 RAPTOR_TS5-scwrl costs 0 real_cost = -13.7181 RAPTOR_TS5 costs 0 real_cost = -13.3309 RAPTOR_TS4-scwrl costs 0 real_cost = -26.7658 RAPTOR_TS4 costs 0 real_cost = -23.6136 RAPTOR_TS3-scwrl costs 0 real_cost = -29.438 RAPTOR_TS3 costs 0 real_cost = -30.4373 RAPTOR_TS2-scwrl costs 0 real_cost = -106.849 RAPTOR_TS2 costs 0 real_cost = -104.1 RAPTOR_TS1-scwrl costs 0 real_cost = -96.5474 RAPTOR_TS1 costs 0 real_cost = -98.7042 RAPTORESS_TS5-scwrl costs 0 real_cost = 137.666 RAPTORESS_TS5 costs 0 real_cost = 141.526 RAPTORESS_TS4-scwrl costs 0 real_cost = 275.65 RAPTORESS_TS4 costs 0 real_cost = 280.25 RAPTORESS_TS3-scwrl costs 0 real_cost = 196.157 RAPTORESS_TS3 costs 0 real_cost = 202.72 RAPTORESS_TS2-scwrl costs 0 real_cost = 144.408 RAPTORESS_TS2 costs 0 real_cost = 150.311 RAPTORESS_TS1-scwrl costs 0 real_cost = -95.1209 RAPTORESS_TS1 costs 0 real_cost = -83.7264 RAPTOR-ACE_TS5-scwrl costs 0 real_cost = -79.2655 RAPTOR-ACE_TS5 costs 0 real_cost = -72.953 RAPTOR-ACE_TS4-scwrl costs 0 real_cost = -108.049 RAPTOR-ACE_TS4 costs 0 real_cost = -106.112 RAPTOR-ACE_TS3-scwrl costs 0 real_cost = -53.1937 RAPTOR-ACE_TS3 costs 0 real_cost = -52.4642 RAPTOR-ACE_TS2-scwrl costs 0 real_cost = -131.215 RAPTOR-ACE_TS2 costs 0 real_cost = -127.641 RAPTOR-ACE_TS1-scwrl costs 0 real_cost = -145.226 RAPTOR-ACE_TS1 costs 0 real_cost = -147.435 Pmodeller6_TS5-scwrl costs 0 real_cost = -91.7715 Pmodeller6_TS5 costs 0 real_cost = -97.2813 Pmodeller6_TS4-scwrl costs 0 real_cost = -99.4699 Pmodeller6_TS4 costs 0 real_cost = -104.724 Pmodeller6_TS3-scwrl costs 0 real_cost = -119.077 Pmodeller6_TS3 costs 0 real_cost = -123.989 Pmodeller6_TS2-scwrl costs 0 real_cost = -96.6226 Pmodeller6_TS2 costs 0 real_cost = -103.6 Pmodeller6_TS1-scwrl costs 0 real_cost = -96.6226 Pmodeller6_TS1 costs 0 real_cost = -103.6 Phyre-2_TS5-scwrl costs 0 real_cost = -21.327 Phyre-2_TS5 costs 0 real_cost = -17.6922 Phyre-2_TS4-scwrl costs 0 real_cost = -3.64387 Phyre-2_TS4 costs 0 real_cost = -1.97513 Phyre-2_TS3-scwrl costs 0 real_cost = 3.22388 Phyre-2_TS3 costs 0 real_cost = 2.5496 Phyre-2_TS2-scwrl costs 0 real_cost = 23.1121 Phyre-2_TS2 costs 0 real_cost = 24.4287 Phyre-2_TS1-scwrl costs 0 real_cost = -16.5877 Phyre-2_TS1 costs 0 real_cost = -14.5327 Phyre-1_TS1-scwrl costs 0 real_cost = -81.4311 Phyre-1_TS1 costs 0 real_cost = -87.1759 Pcons6_TS5-scwrl costs 0 real_cost = -103.525 Pcons6_TS5 costs 0 real_cost = -110.312 Pcons6_TS4-scwrl costs 0 real_cost = -90.9361 Pcons6_TS4 costs 0 real_cost = -96.3916 Pcons6_TS3-scwrl costs 0 real_cost = -110.788 Pcons6_TS3 costs 0 real_cost = -116.081 Pcons6_TS2-scwrl costs 0 real_cost = -109.63 Pcons6_TS2 costs 0 real_cost = -114.838 Pcons6_TS1-scwrl costs 0 real_cost = -99.4699 Pcons6_TS1 costs 0 real_cost = -104.724 PROTINFO_TS5-scwrl costs 0 real_cost = -37.823 PROTINFO_TS5 costs 0 real_cost = -31.4581 PROTINFO_TS4-scwrl costs 0 real_cost = -33.8913 PROTINFO_TS4 costs 0 real_cost = -28.7475 PROTINFO_TS3-scwrl costs 0 real_cost = 48.5532 PROTINFO_TS3 costs 0 real_cost = 48.7715 PROTINFO_TS2-scwrl costs 0 real_cost = -114.18 PROTINFO_TS2 costs 0 real_cost = -117.213 PROTINFO_TS1-scwrl costs 0 real_cost = -126.685 PROTINFO_TS1 costs 0 real_cost = -129.735 PROTINFO-AB_TS5-scwrl costs 0 real_cost = -28.5042 PROTINFO-AB_TS5 costs 0 real_cost = -21.7146 PROTINFO-AB_TS4-scwrl costs 0 real_cost = -87.4576 PROTINFO-AB_TS4 costs 0 real_cost = -84.5332 PROTINFO-AB_TS3-scwrl costs 0 real_cost = -86.9119 PROTINFO-AB_TS3 costs 0 real_cost = -85.5206 PROTINFO-AB_TS2-scwrl costs 0 real_cost = -33.8913 PROTINFO-AB_TS2 costs 0 real_cost = -28.7475 PROTINFO-AB_TS1-scwrl costs 0 real_cost = -88.9848 PROTINFO-AB_TS1 costs 0 real_cost = -82.8696 NN_PUT_lab_TS1-scwrl costs 0 real_cost = 14.4826 NN_PUT_lab_TS1 costs 0 real_cost = 209.165 MetaTasser_TS5-scwrl costs 0 real_cost = 42.2681 MetaTasser_TS5 costs 0 real_cost = 44.3081 MetaTasser_TS4-scwrl costs 0 real_cost = 9.85806 MetaTasser_TS4 costs 0 real_cost = 13.076 MetaTasser_TS3-scwrl costs 0 real_cost = -3.59136 MetaTasser_TS3 costs 0 real_cost = -5.40919 MetaTasser_TS2-scwrl costs 0 real_cost = 46.6907 MetaTasser_TS2 costs 0 real_cost = 35.8174 MetaTasser_TS1-scwrl costs 0 real_cost = -5.03951 MetaTasser_TS1 costs 0 real_cost = -1.37075 Ma-OPUS-server_TS5-scwrl costs 0 real_cost = 255.011 Ma-OPUS-server_TS5 costs 0 real_cost = 256.83 Ma-OPUS-server_TS4-scwrl costs 0 real_cost = 51.0165 Ma-OPUS-server_TS4 costs 0 real_cost = 55.7161 Ma-OPUS-server_TS3-scwrl costs 0 real_cost = -19.1294 Ma-OPUS-server_TS3 costs 0 real_cost = -21.6026 Ma-OPUS-server_TS2-scwrl costs 0 real_cost = -18.9583 Ma-OPUS-server_TS2 costs 0 real_cost = -22.2358 Ma-OPUS-server_TS1-scwrl costs 0 real_cost = -127.347 Ma-OPUS-server_TS1 costs 0 real_cost = -130.679 LOOPP_TS5-scwrl costs 0 real_cost = 103.519 LOOPP_TS5 costs 0 real_cost = 99.7885 LOOPP_TS4-scwrl costs 0 real_cost = 125.3 LOOPP_TS4 costs 0 real_cost = 127.221 LOOPP_TS3-scwrl costs 0 real_cost = 37.7744 LOOPP_TS3 costs 0 real_cost = 43.1725 LOOPP_TS2-scwrl costs 0 real_cost = -0.772805 LOOPP_TS2 costs 0 real_cost = 0.042222 LOOPP_TS1-scwrl costs 0 real_cost = 4.18467 LOOPP_TS1 costs 0 real_cost = 0.81971 Huber-Torda-Server_TS5-scwrl costs 0 real_cost = 706.414 Huber-Torda-Server_TS5 costs 0 real_cost = 745.967 Huber-Torda-Server_TS4-scwrl costs 0 real_cost = 610.474 Huber-Torda-Server_TS4 costs 0 real_cost = 636.285 Huber-Torda-Server_TS3-scwrl costs 0 real_cost = 482.878 Huber-Torda-Server_TS3 costs 0 real_cost = 557.583 Huber-Torda-Server_TS2-scwrl costs 0 real_cost = 567.551 Huber-Torda-Server_TS2 costs 0 real_cost = 633.715 Huber-Torda-Server_TS1-scwrl costs 0 real_cost = 680.653 Huber-Torda-Server_TS1 costs 0 real_cost = 707.687 HHpred3_TS1-scwrl costs 0 real_cost = -180.253 HHpred3_TS1 costs 0 real_cost = -168.242 HHpred2_TS1-scwrl costs 0 real_cost = -180.253 HHpred2_TS1 costs 0 real_cost = -168.242 HHpred1_TS1-scwrl costs 0 real_cost = -142.117 HHpred1_TS1 costs 0 real_cost = -135.542 GeneSilicoMetaServer_TS5-scwrl costs 0 real_cost = -140.13 GeneSilicoMetaServer_TS5 costs 0 real_cost = -135.563 GeneSilicoMetaServer_TS4-scwrl costs 0 real_cost = -116.349 GeneSilicoMetaServer_TS4 costs 0 real_cost = -114.692 GeneSilicoMetaServer_TS3-scwrl costs 0 real_cost = -111.918 GeneSilicoMetaServer_TS3 costs 0 real_cost = -113.392 GeneSilicoMetaServer_TS2-scwrl costs 0 real_cost = -100.613 GeneSilicoMetaServer_TS2 costs 0 real_cost = -103.946 GeneSilicoMetaServer_TS1-scwrl costs 0 real_cost = -125.716 GeneSilicoMetaServer_TS1 costs 0 real_cost = -125.947 Frankenstein_TS5-scwrl costs 0 real_cost = 15.0353 Frankenstein_TS5 costs 0 real_cost = 24.2317 FUNCTION_TS5-scwrl costs 0 real_cost = 16.7317 FUNCTION_TS5 costs 0 real_cost = 15.2092 FUNCTION_TS4-scwrl costs 0 real_cost = -38.3197 FUNCTION_TS4 costs 0 real_cost = -43.5557 FUNCTION_TS3-scwrl costs 0 real_cost = -110.204 FUNCTION_TS3 costs 0 real_cost = -103.684 FUNCTION_TS2-scwrl costs 0 real_cost = -100.848 FUNCTION_TS2 costs 0 real_cost = -97.8608 FUNCTION_TS1-scwrl costs 0 real_cost = -88.9288 FUNCTION_TS1 costs 0 real_cost = -97.1609 FUGUE_AL5-scwrl costs 0 real_cost = 188.111 FUGUE_AL5 costs 0 real_cost = 361.686 FUGUE_AL4-scwrl costs 0 real_cost = 468.472 FUGUE_AL4 costs 0 real_cost = 539.649 FUGUE_AL3-scwrl costs 0 real_cost = 309.962 FUGUE_AL3 costs 0 real_cost = 425.519 FUGUE_AL2-scwrl costs 0 real_cost = 62.366 FUGUE_AL2 costs 0 real_cost = 235.204 FUGUE_AL1-scwrl costs 0 real_cost = -106.725 FUGUE_AL1 costs 0 real_cost = 95.4579 FUGMOD_TS5-scwrl costs 0 real_cost = 105.458 FUGMOD_TS5 costs 0 real_cost = 108.192 FUGMOD_TS4-scwrl costs 0 real_cost = 464.868 FUGMOD_TS4 costs 0 real_cost = 467.426 FUGMOD_TS3-scwrl costs 0 real_cost = 314.329 FUGMOD_TS3 costs 0 real_cost = 311.044 FUGMOD_TS2-scwrl costs 0 real_cost = 33.0212 FUGMOD_TS2 costs 0 real_cost = 28.3959 FUGMOD_TS1-scwrl costs 0 real_cost = -89.0578 FUGMOD_TS1 costs 0 real_cost = -88.923 FPSOLVER-SERVER_TS5-scwrl costs 0 real_cost = 331.287 FPSOLVER-SERVER_TS5 costs 0 real_cost = 333.451 FPSOLVER-SERVER_TS4-scwrl costs 0 real_cost = 341.022 FPSOLVER-SERVER_TS4 costs 0 real_cost = 342.948 FPSOLVER-SERVER_TS3-scwrl costs 0 real_cost = 335.219 FPSOLVER-SERVER_TS3 costs 0 real_cost = 335.864 FPSOLVER-SERVER_TS2-scwrl costs 0 real_cost = 334.628 FPSOLVER-SERVER_TS2 costs 0 real_cost = 337.385 FPSOLVER-SERVER_TS1-scwrl costs 0 real_cost = 348.812 FPSOLVER-SERVER_TS1 costs 0 real_cost = 351.869 FORTE2_AL5-scwrl costs 0 real_cost = 321.159 FORTE2_AL5 costs 0 real_cost = 486.92 FORTE2_AL4-scwrl costs 0 real_cost = 185.647 FORTE2_AL4 costs 0 real_cost = 348.776 FORTE2_AL3-scwrl costs 0 real_cost = 151.842 FORTE2_AL3 costs 0 real_cost = 320.801 FORTE2_AL2-scwrl costs 0 real_cost = 175.664 FORTE2_AL2 costs 0 real_cost = 358.572 FORTE2_AL1-scwrl costs 0 real_cost = -70.3067 FORTE2_AL1 costs 0 real_cost = 137.239 FORTE1_AL5-scwrl costs 0 real_cost = 321.159 FORTE1_AL5 costs 0 real_cost = 486.92 FORTE1_AL4-scwrl costs 0 real_cost = 185.647 FORTE1_AL4 costs 0 real_cost = 348.776 FORTE1_AL3-scwrl costs 0 real_cost = 151.842 FORTE1_AL3 costs 0 real_cost = 320.801 FORTE1_AL2-scwrl costs 0 real_cost = 175.664 FORTE1_AL2 costs 0 real_cost = 358.572 FORTE1_AL1-scwrl costs 0 real_cost = -70.3067 FORTE1_AL1 costs 0 real_cost = 137.239 FOLDpro_TS5-scwrl costs 0 real_cost = 267.509 FOLDpro_TS5 costs 0 real_cost = 268.086 FOLDpro_TS4-scwrl costs 0 real_cost = 302.552 FOLDpro_TS4 costs 0 real_cost = 302.324 FOLDpro_TS3-scwrl costs 0 real_cost = 147.615 FOLDpro_TS3 costs 0 real_cost = 149.742 FOLDpro_TS2-scwrl costs 0 real_cost = 225.44 FOLDpro_TS2 costs 0 real_cost = 229.759 FOLDpro_TS1-scwrl costs 0 real_cost = -126.551 FOLDpro_TS1 costs 0 real_cost = -128.703 FAMS_TS5-scwrl costs 0 real_cost = -135.768 FAMS_TS5 costs 0 real_cost = -134.836 FAMS_TS4-scwrl costs 0 real_cost = -118.493 FAMS_TS4 costs 0 real_cost = -117.615 FAMS_TS3-scwrl costs 0 real_cost = -137.546 FAMS_TS3 costs 0 real_cost = -139.159 FAMS_TS2-scwrl costs 0 real_cost = -124.943 FAMS_TS2 costs 0 real_cost = -120.152 FAMS_TS1-scwrl costs 0 real_cost = -37.6129 FAMS_TS1 costs 0 real_cost = -46.0955 FAMSD_TS5-scwrl costs 0 real_cost = -51.8286 FAMSD_TS5 costs 0 real_cost = -41.9724 FAMSD_TS4-scwrl costs 0 real_cost = -70.9842 FAMSD_TS4 costs 0 real_cost = -76.2923 FAMSD_TS3-scwrl costs 0 real_cost = -129.457 FAMSD_TS3 costs 0 real_cost = -121.396 FAMSD_TS2-scwrl costs 0 real_cost = -70.7918 FAMSD_TS2 costs 0 real_cost = -72.0389 FAMSD_TS1-scwrl costs 0 real_cost = -141.849 FAMSD_TS1 costs 0 real_cost = -134.953 Distill_TS5-scwrl costs 0 real_cost = 579.027 Distill_TS4-scwrl costs 0 real_cost = 577.924 Distill_TS3-scwrl costs 0 real_cost = 556.659 Distill_TS2-scwrl costs 0 real_cost = 539.91 Distill_TS1-scwrl costs 0 real_cost = 543.333 CaspIta-FOX_TS5-scwrl costs 0 real_cost = -33.1855 CaspIta-FOX_TS5 costs 0 real_cost = -38.8302 CaspIta-FOX_TS4-scwrl costs 0 real_cost = 49.9664 CaspIta-FOX_TS4 costs 0 real_cost = 50.5779 CaspIta-FOX_TS3-scwrl costs 0 real_cost = -72.4645 CaspIta-FOX_TS3 costs 0 real_cost = -79.9592 CaspIta-FOX_TS2-scwrl costs 0 real_cost = -46.1335 CaspIta-FOX_TS2 costs 0 real_cost = -52.9456 CaspIta-FOX_TS1-scwrl costs 0 real_cost = 80.8009 CaspIta-FOX_TS1 costs 0 real_cost = 69.8839 CPHmodels_TS1-scwrl costs 0 real_cost = 513.43 CPHmodels_TS1 costs 0 real_cost = 515.594 CIRCLE_TS5-scwrl costs 0 real_cost = -129.457 CIRCLE_TS5 costs 0 real_cost = -121.396 CIRCLE_TS4-scwrl costs 0 real_cost = -137.546 CIRCLE_TS4 costs 0 real_cost = -139.159 CIRCLE_TS3-scwrl costs 0 real_cost = -124.943 CIRCLE_TS3 costs 0 real_cost = -120.152 CIRCLE_TS2-scwrl costs 0 real_cost = -118.493 CIRCLE_TS2 costs 0 real_cost = -117.615 CIRCLE_TS1-scwrl costs 0 real_cost = -135.768 CIRCLE_TS1 costs 0 real_cost = -134.836 Bilab-ENABLE_TS5-scwrl costs 0 real_cost = -14.3971 Bilab-ENABLE_TS5 costs 0 real_cost = -13.5706 Bilab-ENABLE_TS4-scwrl costs 0 real_cost = -17.332 Bilab-ENABLE_TS4 costs 0 real_cost = -16.3094 Bilab-ENABLE_TS3-scwrl costs 0 real_cost = -128.595 Bilab-ENABLE_TS3 costs 0 real_cost = -128.784 Bilab-ENABLE_TS2-scwrl costs 0 real_cost = -104.815 Bilab-ENABLE_TS2 costs 0 real_cost = -105.777 Bilab-ENABLE_TS1-scwrl costs 0 real_cost = 17.674 Bilab-ENABLE_TS1 costs 0 real_cost = 16.7182 BayesHH_TS1-scwrl costs 0 real_cost = -155.198 BayesHH_TS1 costs 0 real_cost = -149.665 ABIpro_TS5-scwrl costs 0 real_cost = 273.433 ABIpro_TS5 costs 0 real_cost = 272.617 ABIpro_TS4-scwrl costs 0 real_cost = 300.039 ABIpro_TS4 costs 0 real_cost = 300.048 ABIpro_TS3-scwrl costs 0 real_cost = 297.747 ABIpro_TS3 costs 0 real_cost = 297.484 ABIpro_TS2-scwrl costs 0 real_cost = 273.566 ABIpro_TS2 costs 0 real_cost = 273.449 ABIpro_TS1-scwrl costs 0 real_cost = 291.957 ABIpro_TS1 costs 0 real_cost = 294.169 3Dpro_TS5-scwrl costs 0 real_cost = 74.9617 3Dpro_TS5 costs 0 real_cost = 76.8803 3Dpro_TS4-scwrl costs 0 real_cost = 87.9373 3Dpro_TS4 costs 0 real_cost = 92.2794 3Dpro_TS3-scwrl costs 0 real_cost = 62.6832 3Dpro_TS3 costs 0 real_cost = 62.8932 3Dpro_TS2-scwrl costs 0 real_cost = 142.795 3Dpro_TS2 costs 0 real_cost = 150.083 3Dpro_TS1-scwrl costs 0 real_cost = -125.966 3Dpro_TS1 costs 0 real_cost = -119.774 3D-JIGSAW_TS5-scwrl costs 0 real_cost = -7.02385 3D-JIGSAW_TS5 costs 0 real_cost = -7.20462 3D-JIGSAW_TS4-scwrl costs 0 real_cost = 107.323 3D-JIGSAW_TS4 costs 0 real_cost = 102.092 3D-JIGSAW_TS3-scwrl costs 0 real_cost = -10.9707 3D-JIGSAW_TS3 costs 0 real_cost = -9.00721 3D-JIGSAW_TS2-scwrl costs 0 real_cost = -17.1768 3D-JIGSAW_TS2 costs 0 real_cost = -18.3301 3D-JIGSAW_TS1-scwrl costs 0 real_cost = 2.27723 3D-JIGSAW_TS1 costs 0 real_cost = 1.57482 3D-JIGSAW_RECOM_TS5-scwrl costs 0 real_cost = -12.4638 3D-JIGSAW_RECOM_TS5 costs 0 real_cost = -4.68903 3D-JIGSAW_RECOM_TS4-scwrl costs 0 real_cost = -16.7663 3D-JIGSAW_RECOM_TS4 costs 0 real_cost = -8.1679 3D-JIGSAW_RECOM_TS3-scwrl costs 0 real_cost = 15.1204 3D-JIGSAW_RECOM_TS3 costs 0 real_cost = 2.22188 3D-JIGSAW_RECOM_TS2-scwrl costs 0 real_cost = -16.9842 3D-JIGSAW_RECOM_TS2 costs 0 real_cost = -26.6347 3D-JIGSAW_RECOM_TS1-scwrl costs 0 real_cost = -21.6726 3D-JIGSAW_RECOM_TS1 costs 0 real_cost = -25.0323 3D-JIGSAW_POPULUS_TS5-scwrl costs 0 real_cost = -13.3578 3D-JIGSAW_POPULUS_TS5 costs 0 real_cost = -23.7102 3D-JIGSAW_POPULUS_TS4-scwrl costs 0 real_cost = -4.1436 3D-JIGSAW_POPULUS_TS4 costs 0 real_cost = -14.9047 3D-JIGSAW_POPULUS_TS3-scwrl costs 0 real_cost = 2.63269 3D-JIGSAW_POPULUS_TS3 costs 0 real_cost = -1.92238 3D-JIGSAW_POPULUS_TS2-scwrl costs 0 real_cost = -6.66916 3D-JIGSAW_POPULUS_TS2 costs 0 real_cost = -16.8431 3D-JIGSAW_POPULUS_TS1-scwrl costs 0 real_cost = -2.5351 3D-JIGSAW_POPULUS_TS1 costs 0 real_cost = -11.5187 dimer//dimer-try9-1t4bA costs 0 real_cost = -174.314 dimer//dimer-try8-1t4bA costs 0 real_cost = -162.803 dimer//dimer-try7-1t4bA costs 0 real_cost = -130.762 dimer//try1-opt2.unpack costs 0 real_cost = -130.135 dimer//try1-opt2.repack-nonPC costs 0 real_cost = -130.219 dimer//try1-opt2 costs 0 real_cost = -130.135 dimer//try1-opt2.gromacs0 costs 0 real_cost = -122.506 dimer//try1-opt1 costs 0 real_cost = -130.708 dimer//try1-opt1-scwrl costs 0 real_cost = -134.832 from-dimer-try1-opt2-A.pdb.gz costs 0 real_cost = -130.135 T0298.try9-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -173.149 T0298.try9-opt2.pdb.gz costs 0 real_cost = -174.413 T0298.try9-opt2.gromacs0.pdb.gz costs 0 real_cost = -173.789 T0298.try9-opt1.pdb.gz costs 0 real_cost = -173.475 T0298.try9-opt1-scwrl.pdb.gz costs 0 real_cost = -175.082 T0298.try8-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -160.037 T0298.try8-opt2.pdb.gz costs 0 real_cost = -162.838 T0298.try8-opt2.gromacs0.pdb.gz costs 0 real_cost = -160.838 T0298.try8-opt1.pdb.gz costs 0 real_cost = -169.955 T0298.try8-opt1-scwrl.pdb.gz costs 0 real_cost = -171.535 T0298.try7-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -127.21 T0298.try7-opt2.pdb.gz costs 0 real_cost = -130.692 T0298.try7-opt2.gromacs0.pdb.gz costs 0 real_cost = -128.631 T0298.try7-opt1.pdb.gz costs 0 real_cost = -128.147 T0298.try7-opt1-scwrl.pdb.gz costs 0 real_cost = -134.233 T0298.try6-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -126.723 T0298.try6-opt2.pdb.gz costs 0 real_cost = -128.277 T0298.try6-opt2.gromacs0.pdb.gz costs 0 real_cost = -127.903 T0298.try6-opt1.pdb.gz costs 0 real_cost = -128.083 T0298.try6-opt1-scwrl.pdb.gz costs 0 real_cost = -131.598 T0298.try5-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -125.402 T0298.try5-opt2.pdb.gz costs 0 real_cost = -127.989 T0298.try5-opt2.gromacs0.pdb.gz costs 0 real_cost = -130.011 T0298.try5-opt1.pdb.gz costs 0 real_cost = -123.51 T0298.try5-opt1-scwrl.pdb.gz costs 0 real_cost = -123.374 T0298.try4-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -85.2046 T0298.try4-opt2.pdb.gz costs 0 real_cost = -85.2935 T0298.try4-opt2.gromacs0.pdb.gz costs 0 real_cost = -86.6908 T0298.try4-opt1.pdb.gz costs 0 real_cost = -81.9027 T0298.try4-opt1-scwrl.pdb.gz costs 0 real_cost = -82.4435 T0298.try3-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -116.675 T0298.try3-opt2.pdb.gz costs 0 real_cost = -118.87 T0298.try3-opt2.gromacs0.pdb.gz costs 0 real_cost = -119.727 T0298.try3-opt1.pdb.gz costs 0 real_cost = -117.529 T0298.try3-opt1-scwrl.pdb.gz costs 0 real_cost = -119.008 T0298.try2-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -129.731 T0298.try2-opt2.pdb.gz costs 0 real_cost = -133.941 T0298.try2-opt2.gromacs0.pdb.gz costs 0 real_cost = -132.625 T0298.try2-opt1.pdb.gz costs 0 real_cost = -127.12 T0298.try2-opt1-scwrl.pdb.gz costs 0 real_cost = -128.372 T0298.try1-opt2.repack-nonPC.pdb.gz costs 0 real_cost = -133.25 T0298.try1-opt2.pdb.gz costs 0 real_cost = -132.428 T0298.try1-opt2.gromacs0.pdb.gz costs 0 real_cost = -134.045 T0298.try1-opt1.pdb.gz costs 0 real_cost = -136.989 T0298.try1-opt1-scwrl.pdb.gz costs 0 real_cost = -134.545 ../model5.ts-submitted costs 0 real_cost = -128.219 ../model4.ts-submitted costs 0 real_cost = -132.329 ../model3.ts-submitted costs 0 real_cost = -162.853 ../model2.ts-submitted costs 0 real_cost = -129.836 ../model1.ts-submitted costs 0 real_cost = -174.422 align5 costs 0 real_cost = 143.871 align4 costs 0 real_cost = 109.552 align3 costs 0 real_cost = 50.3284 align2 costs 0 real_cost = -1.92528 align1 costs 0 real_cost = -100.44 T0298.try1-opt2.pdb costs 0 real_cost = -132.438 model5-scwrl costs 0 real_cost = -133.977 model5.ts-submitted costs 0 real_cost = -128.219 model4-scwrl costs 0 real_cost = -134.862 model4.ts-submitted costs 0 real_cost = -132.329 model3-scwrl costs 0 real_cost = -164.807 model3.ts-submitted costs 0 real_cost = -162.853 model2-scwrl costs 0 real_cost = -134.638 model2.ts-submitted costs 0 real_cost = -129.836 model1-scwrl costs 0 real_cost = -173.95 model1.ts-submitted costs 0 real_cost = -174.422 2hjsA costs 0 real_cost = -890.4 # command:CPU_time= 4122.89 sec, elapsed time= 4522.96 sec) # command:rm -f sort.tmp /projects/compbio/bin/sorttbl real_cost < decoys/evaluate.rdb > sort.tmp mv -f sort.tmp decoys/evaluate.rdb mv -f decoys/evaluate.pretty decoys/evaluate.pretty.old /projects/compbio/experiments/protein-predict/casp7/scripts/prettyscore -terse -targpfx -decpoint < decoys/evaluate.rdb > decoys/evaluate.pretty