Best Alignments for T0297

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1es9A/T0297-1es9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1es9A/T0297-1es9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5544e-191.06e-93 1wab c.23.10.3
1ivnA/T0297-1ivnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ivnA/T0297-1ivnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7418e-178.01e-82 c.23.10.5
1yzfA/T0297-1yzfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yzfA/T0297-1yzfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4312e-121.94e-81
1k7cA/T0297-1k7cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k7cA/T0297-1k7cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5494e-117.39e-61 c.23.10.4
1vjgA/T0297-1vjgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjgA/T0297-1vjgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2035e-116.58e-71 c.23.10.6
1esc/T0297-1esc-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1esc/T0297-1esc-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4600e-091.22e-54 1esc c.23.10.1
1zmbA/T0297-1zmbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zmbA/T0297-1zmbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5400e-041.39e-46
2apjA/T0297-2apjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2apjA/T0297-2apjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9485e-032.66e-44
1hdoA/T0297-1hdoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hdoA/T0297-1hdoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6113e-026.48e-21 1he2A c.2.1.2
1vbuA/T0297-1vbuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbuA/T0297-1vbuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4594e-012.19e-24

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001