Best Alignments for T0297

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ivnA/T0297-1ivnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ivnA/T0297-1ivnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5100e-168.01e-82 c.23.10.5
1wab/T0297-1wab-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wab/T0297-1wab-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2685e-164.40e-78 1wab c.23.10.3
1yzfA/T0297-1yzfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yzfA/T0297-1yzfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8072e-161.94e-81
1vjgA/T0297-1vjgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjgA/T0297-1vjgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0980e-128.13e-68 c.23.10.6
1k7cA/T0297-1k7cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k7cA/T0297-1k7cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4227e-127.39e-61 c.23.10.4
1esc/T0297-1esc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1esc/T0297-1esc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9719e-095.65e-54 1esc c.23.10.1
1zmbA/T0297-1zmbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zmbA/T0297-1zmbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7380e-061.39e-46
2apjA/T0297-2apjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2apjA/T0297-2apjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4858e-052.66e-44
1vbuA/T0297-1vbuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbuA/T0297-1vbuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8699e-022.71e-23
1udc/T0297-1udc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1udc/T0297-1udc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8621e-021.91e-26 1xel c.2.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001