Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vbuA/T0296-1vbuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbuA/T0296-1vbuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6716e-019.52e-16
1z41A/T0296-1z41A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z41A/T0296-1z41A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5719e-013.12e-18
1ps9A/T0296-1ps9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ps9A/T0296-1ps9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0439e-011.21e-19 c.1.4.1
c.3.1.1
c.4.1.1
1xyzA/T0296-1xyzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xyzA/T0296-1xyzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6877e-019.46e-15 1taxA c.1.8.3
1to3A/T0296-1to3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1to3A/T0296-1to3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0574e-011.99e-11 c.1.10.1
1j0aA/T0296-1j0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0aA/T0296-1j0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9152e-016.14e-08 c.79.1.1
1uqrA/T0296-1uqrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uqrA/T0296-1uqrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0338e+002.10e-11 c.23.13.1
1ceo/T0296-1ceo-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ceo/T0296-1ceo-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0600e+006.37e-18 1ceo c.1.8.3
1a0cA/T0296-1a0cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a0cA/T0296-1a0cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2863e+007.64e-19 1a0cA c.1.15.3
2chnA/T0296-2chnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2chnA/T0296-2chnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2935e+003.33e-10

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001