Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i60A/T0296-1i60A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i60A/T0296-1i60A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6605e-015.62e-23 c.1.15.4
1c93A/T0296-1c93A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c93A/T0296-1c93A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9934e-011.11e-21 2ebn c.1.8.5
1j0dA/T0296-1j0dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0dA/T0296-1j0dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9119e-012.17e-20 c.79.1.1
1p1xA/T0296-1p1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p1xA/T0296-1p1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2421e+002.10e-23 c.1.10.1
1qtwA/T0296-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qtwA/T0296-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9489e+001.33e-14 1qumA c.1.15.1
1ur4A/T0296-1ur4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ur4A/T0296-1ur4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1816e+005.90e-24
1z41A/T0296-1z41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z41A/T0296-1z41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2505e+001.00e-20
1mjhA/T0296-1mjhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mjhA/T0296-1mjhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3824e+001.31e-11 1mjhA c.26.2.4
1o60A/T0296-1o60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o60A/T0296-1o60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9441e+001.56e-14 c.1.10.4
1ceo/T0296-1ceo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ceo/T0296-1ceo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0494e+001.31e-20 1ceo c.1.8.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001