Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1qltA/T0296-1qltA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qltA/T0296-1qltA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7900e+001.09e+04 1qltA d.58.32.1
d.145.1.1
2b06A/T0296-2b06A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b06A/T0296-2b06A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2021e+004.42e-07
1amuA/T0296-1amuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1amuA/T0296-1amuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3405e+007.04e-06 1amuA e.23.1.1
1tozA/T0296-1tozA-t04-global-adpstyle1.a2m 1tozA/T0296-1tozA-t04-global-adpstyle1.al 6.5252e+001.05e-03
1o50A/T0296-1o50A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o50A/T0296-1o50A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0759e+011.15e-07 d.37.1.1
d.37.1.1
1om4A/T0296-1om4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1om4A/T0296-1om4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2757e+017.97e-10 d.174.1.1
1ex1A/T0296-1ex1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ex1A/T0296-1ex1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4980e+013.19e-03 1ex1A c.1.8.7
c.23.11.1
2lbd/T0296-2lbd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2lbd/T0296-2lbd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6200e+013.15e+01 2lbd a.123.1.1
1q7rA/T0296-1q7rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7rA/T0296-1q7rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8400e+013.06e-06 c.23.16.1
1rypI/T0296-1rypI-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rypI/T0296-1rypI-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8701e+012.33e-10 d.153.1.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001