Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq9A/T0295-1zq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq9A/T0295-1zq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4961e-276.04e-140
1qyrA/T0295-1qyrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qyrA/T0295-1qyrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0013e-252.68e-132 c.66.1.24
1jg1A/T0295-1jg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0295-1jg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2295e-173.30e-61 c.66.1.7
1f3lA/T0295-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f3lA/T0295-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4770e-161.82e-56 1g6q2 c.66.1.6
1dl5A/T0295-1dl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0295-1dl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9451e-163.94e-64 1dl5A c.66.1.7
d.197.1.1
1dusA/T0295-1dusA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0295-1dusA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0995e-132.56e-45 1dusA c.66.1.4
1i9gA/T0295-1i9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9gA/T0295-1i9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2879e-135.35e-56 c.66.1.13
1g38A/T0295-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g38A/T0295-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8701e-128.80e-51 2admA c.66.1.27
1im8A/T0295-1im8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1im8A/T0295-1im8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6641e-126.27e-57 c.66.1.14
1xxlA/T0295-1xxlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxlA/T0295-1xxlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8337e-124.50e-77

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001