Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq9A/T0295-1zq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq9A/T0295-1zq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3181e-343.87e-138
1qyrA/T0295-1qyrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qyrA/T0295-1qyrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6525e-304.78e-132 c.66.1.24
1xxlA/T0295-1xxlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxlA/T0295-1xxlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9048e-184.50e-77
1vl5A/T0295-1vl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl5A/T0295-1vl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3125e-161.44e-74 c.66.1.41
1wznA/T0295-1wznA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wznA/T0295-1wznA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0580e-163.01e-64
1dl5A/T0295-1dl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0295-1dl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3604e-163.94e-64 1dl5A c.66.1.7
d.197.1.1
1ve3A/T0295-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ve3A/T0295-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1124e-165.38e-61
2fytA/T0295-2fytA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fytA/T0295-2fytA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1501e-161.10e-58
1jg1A/T0295-1jg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0295-1jg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2963e-153.30e-61 c.66.1.7
1f3lA/T0295-1f3lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f3lA/T0295-1f3lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7634e-159.26e-56 1g6q2 c.66.1.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001