Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq9A/T0295-1zq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq9A/T0295-1zq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3185e-217.33e-46
1i4wA/T0295-1i4wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i4wA/T0295-1i4wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7638e-013.04e-07 c.66.1.24
1yf3A/T0295-1yf3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yf3A/T0295-1yf3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9058e+007.86e-03
1ap4/T0295-1ap4-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ap4/T0295-1ap4-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9911e+008.84e-05 1ncx a.39.1.5
1mvwC/T0295-1mvwC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mvwC/T0295-1mvwC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6132e+001.32e-03 i.15.1.1
1q0sA/T0295-1q0sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q0sA/T0295-1q0sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1288e+006.27e-01 c.66.1.28
1m65A/T0295-1m65A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m65A/T0295-1m65A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3628e+003.06e-05 c.6.3.1
1i58A/T0295-1i58A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i58A/T0295-1i58A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7420e+002.82e-03 1b3qA d.122.1.3
1cy5A/T0295-1cy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cy5A/T0295-1cy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0164e+011.51e-06 1cy5A a.77.1.3
1yadA/T0295-1yadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yadA/T0295-1yadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0551e+016.91e-03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001