Best Alignments for T0294

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gdhA/T0294-1gdhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gdhA/T0294-1gdhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2470e-391.20e-197 1gdhA c.2.1.4
c.23.12.1
2nacA/T0294-2nacA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nacA/T0294-2nacA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1596e-392.48e-171 2nadA c.2.1.4
c.23.12.1
1wwkA/T0294-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0294-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7513e-342.15e-219
2g76A/T0294-2g76A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g76A/T0294-2g76A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1202e-321.60e-209
1psdA/T0294-1psdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1psdA/T0294-1psdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0043e-313.91e-191 1psdA c.2.1.4
c.23.12.1
d.58.18.1
2d0iA/T0294-2d0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d0iA/T0294-2d0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0806e-313.23e-194
1sc6A/T0294-1sc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sc6A/T0294-1sc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6157e-291.37e-180
1xdwA/T0294-1xdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdwA/T0294-1xdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5790e-287.36e-166
1li4A/T0294-1li4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1li4A/T0294-1li4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2578e-176.85e-86 c.2.1.4
c.23.12.3
1xwfA/T0294-1xwfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwfA/T0294-1xwfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7845e-161.02e-87

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001