Best Alignments for T0294

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gdhA/T0294-1gdhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gdhA/T0294-1gdhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9256e-361.20e-197 1gdhA c.2.1.4
c.23.12.1
2nacA/T0294-2nacA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nacA/T0294-2nacA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6133e-342.48e-171 2nadA c.2.1.4
c.23.12.1
1dxy/T0294-1dxy-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dxy/T0294-1dxy-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0092e-338.86e-166 1dxy c.2.1.4
c.23.12.1
1gpjA/T0294-1gpjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpjA/T0294-1gpjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2637e-091.34e-45 a.151.1.1
c.2.1.7
d.58.39.1
1vpdA/T0294-1vpdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpdA/T0294-1vpdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1017e-081.03e-38
1c1dA/T0294-1c1dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c1dA/T0294-1c1dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3394e-071.50e-49 1bw9A c.2.1.7
c.58.1.1
1a4iA/T0294-1a4iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a4iA/T0294-1a4iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0697e-075.89e-48 1a4iA c.2.1.7
c.58.1.2
1uufA/T0294-1uufA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uufA/T0294-1uufA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4884e-062.61e-26 b.35.1.2
c.2.1.1
1gtmA/T0294-1gtmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gtmA/T0294-1gtmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8655e-061.01e-36 1hwyA c.2.1.7
c.58.1.1
2d5cA/T0294-2d5cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d5cA/T0294-2d5cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1048e-052.55e-38

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001