CreatePredAlphaCost pred_alpha2k alpha11 T0293.t2k.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha04 alpha11 T0293.t04.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha06 alpha11 T0293.t06.alpha.rdb 2 alpha alpha_prev sum SetCost wet6.5 15 near_backbone 5 way_back 5 dry5 15 dry6.5 20 dry8 15 dry12 5 \ phobic_fit 2 \ sidechain 5 \ n_ca_c 5 bad_peptide 10 \ bystroff 5 \ soft_clashes 40 backbone_clashes 2 \ break 200 \ pred_alpha2k 2 \ pred_alpha04 3 \ pred_alpha06 4 \ constraints 40 \ hbond_geom 5 \ hbond_geom_backbone 10 \ hbond_geom_beta 50 \ hbond_geom_beta_pair 100 \ maybe_metal 0.5 \ missing_atoms 1 # from decoys/fromTry4.sheets SheetConstraint F23 I29 V38 E32 hbond G24 1 SheetConstraint R63 I68 W86 T91 hbond G65 1 SheetConstraint G65 I68 F139 C142 hbond I66 1 SheetConstraint Y87 V93 L113 V119 hbond F88 1 SheetConstraint D138 N143 R202 M207 hbond C140 1 SheetConstraint L201 L208 Y249 W242 hbond Y204 1 # From SAM_T06_server_TS1.sheets: SheetConstraint W203 G209 S247 R241 hbond Y204 1 SheetConstraint V229 C235 W246 M240 hbond T230 10 # Added by hand SheetConstraint T230 F234 E32 P36 hbond Y231 5 Hbond Q236.N T239.O 1 Hbond Q236.O T239.N 1 Hbond F234.N R241.O 3 Hbond F234.O R241.N 3 Hbond T232.N A243.O 3 Hbond T232.O A243.N 3 Hbond T230.N A245.O 3 Hbond T230.O A245.N 3