Best Alignments for T0293

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1o54A/T0293-1o54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o54A/T0293-1o54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4653e-141.05e-69 c.66.1.13
1im8A/T0293-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1im8A/T0293-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2857e-147.32e-65 c.66.1.14
1dusA/T0293-1dusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0293-1dusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2555e-134.58e-56 1dusA c.66.1.4
1dl5A/T0293-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0293-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9802e-131.03e-61 1dl5A c.66.1.7
d.197.1.1
1g38A/T0293-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g38A/T0293-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4188e-133.34e-49 2admA c.66.1.27
1sqgA/T0293-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqgA/T0293-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0909e-131.22e-49 a.79.1.3
c.66.1.38
1ixkA/T0293-1ixkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ixkA/T0293-1ixkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8662e-139.92e-56 c.66.1.38
1f3lA/T0293-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f3lA/T0293-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1444e-133.10e-52 1g6q2 c.66.1.6
1jg1A/T0293-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0293-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8879e-131.23e-57 c.66.1.7
1xdzA/T0293-1xdzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdzA/T0293-1xdzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0174e-114.89e-52

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001