Best Alignments for T0293

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1nv8A/T0293-1nv8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nv8A/T0293-1nv8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9343e-193.51e-81 c.66.1.30
1dusA/T0293-1dusA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0293-1dusA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6260e-143.30e-67 1dusA c.66.1.4
2as0A/T0293-2as0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2as0A/T0293-2as0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6201e-143.64e-59
1ufkA/T0293-1ufkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ufkA/T0293-1ufkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7851e-133.39e-59 c.66.1.39
1wznA/T0293-1wznA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wznA/T0293-1wznA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6518e-132.27e-65
1l3iA/T0293-1l3iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l3iA/T0293-1l3iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6513e-121.19e-61 c.66.1.22
1ve3A/T0293-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ve3A/T0293-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8303e-122.04e-57
2fk8A/T0293-2fk8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fk8A/T0293-2fk8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7711e-124.90e-58
1kpgA/T0293-1kpgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kpgA/T0293-1kpgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2015e-116.23e-57 c.66.1.18
1wxxA/T0293-1wxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxxA/T0293-1wxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3582e-119.94e-54

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001