Best Alignments for T0292

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1cmkE/T0292-1cmkE-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cmkE/T0292-1cmkE-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6500e-434.68e-149 1cdkA d.144.1.7
1cdkA/T0292-1cdkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cdkA/T0292-1cdkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6500e-436.99e-153 1cdkA d.144.1.7
1xh9A/T0292-1xh9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xh9A/T0292-1xh9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2253e-412.61e-153
1xjdA/T0292-1xjdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xjdA/T0292-1xjdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3250e-408.69e-153
2bdwA/T0292-2bdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bdwA/T0292-2bdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2244e-399.86e-153
2bfxA/T0292-2bfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bfxA/T0292-2bfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4984e-392.64e-155
1zrzA/T0292-1zrzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zrzA/T0292-1zrzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6163e-373.41e-143
1yhvA/T0292-1yhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yhvA/T0292-1yhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2262e-376.35e-141
2eueA/T0292-2eueA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2eueA/T0292-2eueA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5165e-372.46e-143
2f57A/T0292-2f57A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f57A/T0292-2f57A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7505e-361.25e-139

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001